RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ZNF669Q96BR6 464 aaPredicted RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 C9orf72Q96LT7 481 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 NAT9Q9BTE0 207 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 ZMYND15Q9H091 742 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 MVB12BQ9H7P6 319 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 SEMA5BQ9P283 1151 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 FAM8A1Q9UBU6 413 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 GNPTGQ9UJJ9 305 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 VPS9D1Q9Y2B5 631 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 PCDHGA3Q9Y5H0 932 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 RPS6KL1Q9Y6S9 549 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 BOD1L1Q8NFC6 3051 aa15.77■□□□□ 0.11
LSM4-206ENST00000600289 TTI1O43156 1089 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 GPC4O75487 556 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 NDUFS3O75489 264 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 HGFP14210 728 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 TYRP1P17643 537 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 AMD1P17707 334 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 PGAM1P18669 254 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 ACADLP28330 430 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 PDHA2P29803 388 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 CSTF2P33240 577 aaKnown RBP eCLIP15.76■□□□□ 0.11
LSM4-206ENST00000600289 PREPP48147 710 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 CXADRP78310 365 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 TLE3Q04726 772 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 SYTL3Q4VX76 610 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 TAF1BQ53T94 588 aaPredicted RBP15.76■□□□□ 0.11
LSM4-206ENST00000600289 DNAJC21Q5F1R6 531 aaKnown RBP15.76■□□□□ 0.11
LSM4-206ENST00000600289 HIBCHQ6NVY1 386 aaPredicted RBP15.76■□□□□ 0.11
LSM4-206ENST00000600289 LDB1Q86U70 411 aaPredicted RBP15.76■□□□□ 0.11
LSM4-206ENST00000600289 CILP2Q8IUL8 1156 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 SLC22A15Q8IZD6 547 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 CARFQ8N187 725 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 BMPERQ8N8U9 685 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 ACVR1CQ8NER5 493 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 SPATA4Q8NEY3 305 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 LPGAT1Q92604 370 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 STAMBPL1Q96FJ0 436 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 WBP1Q96G27 269 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 ZDHHC12Q96GR4 267 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 SNF8Q96H20 258 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 PANX3Q96QZ0 392 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 TFB2MQ9H5Q4 396 aaKnown RBP15.76■□□□□ 0.11
LSM4-206ENST00000600289 INTS10Q9NVR2 710 aaKnown RBP15.76■□□□□ 0.11
LSM4-206ENST00000600289 PISDQ9UG56 409 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 CFAP20Q9Y6A4 193 aaKnown RBP15.76■□□□□ 0.11
LSM4-206ENST00000600289 MYO9AB2RTY4 2548 aa15.76■□□□□ 0.11
LSM4-206ENST00000600289 FLNCQ14315 2725 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 OR5K3A6NET4 321 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 BHMG1C9JSJ3 638 aaPredicted RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 H3BMM5 538 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 KPNA5O15131 536 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 CAPN5O15484 640 aaPredicted RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 SEC31AO94979 1220 aaKnown RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 TTC4O95801 387 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 ESR1P03372 595 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 NTRK1P04629 796 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 FGF3P11487 239 aaPredicted RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 ITIH1P19827 911 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 MPSTP25325 297 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 CD82P27701 267 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 AOAHP28039 575 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 CCR7P32248 378 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 ETV5P41161 510 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 PPM1FP49593 454 aaPredicted RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 GFERP55789 205 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 RAB15P59190 212 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 PLCL1Q15111 1095 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 NEPROQ6NW34 567 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 FOXR1Q6PIV2 292 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 LKAAEAR1Q8TD35 194 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 ASZ1Q8WWH4 475 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 TFGQ92734 400 aaPredicted RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 LRRC39Q96DD0 335 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 BIRC8Q96P09 236 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 KRT12Q99456 494 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 CD180Q99467 661 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 EBNA1BP2Q99848 306 aaKnown RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 TRIM56Q9BRZ2 755 aaKnown RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 TRIM51Q9BSJ1 452 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 DDA1Q9BW61 102 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 DPH1Q9BZG8 443 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 ZNF768Q9H5H4 540 aaKnown RBP15.75■□□□□ 0.11
LSM4-206ENST00000600289 CDYLQ9Y232 598 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 FAM169AQ9Y6X4 670 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 SDK2Q58EX2 2172 aa15.75■□□□□ 0.11
LSM4-206ENST00000600289 BSNQ9UPA5 3926 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 FAM187AA6NFU0 413 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 C9orf172C9J069 976 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.74■□□□□ 0.11
LSM4-206ENST00000600289 MATN2O00339 956 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 TP73O15350 636 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 SLCO2B1O94956 709 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 APOA4P06727 396 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 SLC5A2P31639 672 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 DHX9Q08211 1270 aaKnown RBP15.74■□□□□ 0.11
LSM4-206ENST00000600289 LY6DQ14210 128 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 LONRF1Q17RB8 773 aa15.74■□□□□ 0.11
LSM4-206ENST00000600289 COLEC12Q5KU26 742 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms