RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 PANX3Q96QZ0 392 aa14.82□□□□□ -0.04
LIG1-219ENST00000600055 CMKLR1Q99788 373 aa14.82□□□□□ -0.04
LIG1-219ENST00000600055 LRRC1Q9BTT6 524 aa14.82□□□□□ -0.04
LIG1-219ENST00000600055 HGH1Q9BTY7 390 aa14.82□□□□□ -0.04
LIG1-219ENST00000600055 INTS10Q9NVR2 710 aaKnown RBP14.82□□□□□ -0.04
LIG1-219ENST00000600055 WHRNQ9P202 907 aa14.82□□□□□ -0.04
LIG1-219ENST00000600055 SLC17A6Q9P2U8 582 aa14.82□□□□□ -0.04
LIG1-219ENST00000600055 ZC3H7BQ9UGR2 993 aaKnown RBP14.82□□□□□ -0.04
LIG1-219ENST00000600055 FBXO5Q9UKT4 447 aa14.82□□□□□ -0.04
LIG1-219ENST00000600055 UTP11Q9Y3A2 253 aaKnown RBP14.82□□□□□ -0.04
LIG1-219ENST00000600055 MN1Q10571 1320 aaPredicted RBP14.82□□□□□ -0.04
LIG1-219ENST00000600055 CEP295Q9C0D2 2601 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 FREM2Q5SZK8 3169 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 OR6C74A6NCV1 312 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 E7ESA3 106 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 KIF2AO00139 706 aaPredicted RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 PFDN6O15212 129 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 KIF1CO43896 1103 aaKnown RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 DXOO77932 396 aaKnown RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 HAUS5O94927 633 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 C9P02748 559 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 ESR1P03372 595 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 APOA4P06727 396 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 JMJD7P0C870 316 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 PKMP14618 531 aaKnown RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 NDUFS1P28331 727 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 RBMS1P29558 406 aaKnown RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 MAPK10P53779 464 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 ADARP55265 1226 aaKnown RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 PLOD1Q02809 727 aaPredicted RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 ABRQ12979 859 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 CALCOCO2Q13137 446 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 TBC1D25Q3MII6 688 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 IRGCQ6NXR0 463 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 ZNF549Q6P9A3 640 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 TRMT10BQ6PF06 316 aaKnown RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 CNSTQ6PJW8 725 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 FAM92BQ6ZTR7 304 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 SLC22A15Q8IZD6 547 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 LSMEM2Q8N112 164 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 FBXO36Q8NEA4 188 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 ACVR1CQ8NER5 493 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 OR4E2Q8NGC2 313 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 OR52E1Q8NGJ3 308 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 ZFPM2Q8WW38 1151 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 ASZ1Q8WWH4 475 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 C9orf72Q96LT7 481 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 FAM167BQ9BTA0 163 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 NAT9Q9BTE0 207 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 XKR8Q9H6D3 395 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 MVB12BQ9H7P6 319 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 OCIAD1Q9NX40 245 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 TSR3Q9UJK0 312 aaKnown RBP14.81□□□□□ -0.04
LIG1-219ENST00000600055 ASF1AQ9Y294 204 aa14.81□□□□□ -0.04
LIG1-219ENST00000600055 WDFY3Q8IZQ1 3526 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 KIF26BQ2KJY2 2108 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 OR5K3A6NET4 321 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 EFCAB7A8K855 629 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 CDRT15L2A8MXV6 281 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 HGSO14964 777 aaPredicted RBP14.8□□□□□ -0.04
LIG1-219ENST00000600055 SLCO2B1O94956 709 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 TPBGLP0DKB5 382 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 FGF3P11487 239 aaPredicted RBP14.8□□□□□ -0.04
LIG1-219ENST00000600055 POLR2CP19387 275 aaPredicted RBP14.8□□□□□ -0.04
LIG1-219ENST00000600055 CHRM3P20309 590 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 CSTF2P33240 577 aaKnown RBP eCLIP14.8□□□□□ -0.04
LIG1-219ENST00000600055 CARSP49589 748 aaKnown RBP14.8□□□□□ -0.04
LIG1-219ENST00000600055 C8orf74Q6P047 294 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 IGF2-ASQ6U949 168 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 OTOAQ7RTW8 1153 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 LMNTD2Q8IXW0 634 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 C2CD4AQ8NCU7 369 aaPredicted RBP14.8□□□□□ -0.04
LIG1-219ENST00000600055 AGBL5Q8NDL9 886 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 CFAP61Q8NHU2 1237 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 KIF18AQ8NI77 898 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 CALML6Q8TD86 181 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 LCN9Q8WX39 176 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 FGF11Q92914 225 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 ART4Q93070 314 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 LRRC39Q96DD0 335 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 CERS2Q96G23 380 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 ZNF578Q96N58 590 aaPredicted RBP14.8□□□□□ -0.04
LIG1-219ENST00000600055 SLC30A3Q99726 388 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 RAB17Q9H0T7 212 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 HRASLS2Q9NWW9 162 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 AKAP7Q9P0M2 348 aaPredicted RBP14.8□□□□□ -0.04
LIG1-219ENST00000600055 EPHA6Q9UF33 1036 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 VPS9D1Q9Y2B5 631 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 CHD8Q9HCK8 2581 aa14.8□□□□□ -0.04
LIG1-219ENST00000600055 ESYT3A0FGR9 886 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 SRRM3A6NNA2 597 aaPredicted RBP14.79□□□□□ -0.04
LIG1-219ENST00000600055 H3BMM5 538 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 NDC80O14777 642 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 ITGA2BP08514 1039 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 GABRB3P28472 473 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 ABCG1P45844 678 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 SEPHS1P49903 392 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 PLTPP55058 493 aa14.79□□□□□ -0.04
LIG1-219ENST00000600055 TMED2Q15363 201 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms