RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 DPPA4Q7L190 304 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 FAM110BQ8TC76 370 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 ASB11Q8WXH4 323 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 LRRC58Q96CX6 371 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 MTFMTQ96DP5 389 aaKnown RBP14.17□□□□□ -0.14
VRK3-217ENST00000599538 DCUN1D1Q96GG9 259 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 PKP2Q99959 881 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 P2RY13Q9BPV8 354 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 MCOLN1Q9GZU1 580 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 MTIF3Q9H2K0 278 aaKnown RBP14.17□□□□□ -0.14
VRK3-217ENST00000599538 KLQ9UEF7 1012 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 RIMS3Q9UJD0 308 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 SLC27A6Q9Y2P4 619 aa14.17□□□□□ -0.14
VRK3-217ENST00000599538 PRSS51A0A1B0GVH4 220 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 A0A1W2PP18 115 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 INPP4BO15327 924 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 NUAK1O60285 661 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 RNASEH2AO75792 299 aaKnown RBP14.16□□□□□ -0.14
VRK3-217ENST00000599538 ANXA5P08758 320 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 XPAP23025 273 aaPredicted RBP14.16□□□□□ -0.14
VRK3-217ENST00000599538 DCDC1P59894 354 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 SHHQ15465 462 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 TIGD2Q4W5G0 525 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 RABL3Q5HYI8 236 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 IL23RQ5VWK5 629 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 PDSS2Q86YH6 399 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 DNAJB14Q8TBM8 379 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 ELMO1Q92556 727 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 KLHL42Q9P2K6 505 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 SLC8A2Q9UPR5 921 aa14.16□□□□□ -0.14
VRK3-217ENST00000599538 POLR3HQ9Y535 204 aaPredicted RBP14.16□□□□□ -0.14
VRK3-217ENST00000599538 HEPACAM2A8MVW5 462 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 PRAMEF4O60810 478 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ELFN1P0C7U0 828 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 EPB42P16452 691 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 MRPL19P49406 292 aaKnown RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 POLR2JP52435 117 aaKnown RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 KCNK10P57789 538 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ERVK-21P61565 698 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 TLR1Q15399 786 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 PDCD4Q53EL6 469 aaKnown RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 SAMD4BQ5PRF9 694 aaKnown RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 PRAMEF9Q5VWM5 478 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 GET4Q7L5D6 327 aaPredicted RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 TRAM1L1Q8N609 369 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 RASGEF1AQ8N9B8 481 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 DDHD1Q8NEL9 900 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 SLCO4A1Q96BD0 722 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 NTMT1Q9BV86 223 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 SLC12A9Q9BXP2 914 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 KLHL4Q9C0H6 718 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 PARVBQ9HBI1 364 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 HEBP1Q9NRV9 189 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ABCD2Q9UBJ2 740 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 DKK3Q9UBP4 350 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 CIDEBQ9UHD4 219 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ZFC3H1O60293 1989 aaKnown RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 ANKRD28O15084 1053 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ASLP04424 464 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 POU2F2P09086 479 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 MSH3P20585 1137 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ATP6V1B2P21281 511 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 CASP2P42575 452 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ST8SIA6P61647 398 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 BLMHQ13867 455 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ACOX1Q15067 660 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 CPSF6Q16630 551 aaKnown RBP eCLIP14.15□□□□□ -0.14
VRK3-217ENST00000599538 DUSP6Q16828 381 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 PTCHD3Q3KNS1 767 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 GRAMD1BQ3KR37 738 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 RARS2Q5T160 578 aaKnown RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 C9orf64Q5T6V5 341 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 OGFRL1Q5TC84 451 aaPredicted RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 NEK5Q6P3R8 708 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 SLC2A7Q6PXP3 512 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 CYP20A1Q6UW02 462 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 MINDY1Q8N5J2 469 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 BTN2A2Q8WVV5 523 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 ARRDC3Q96B67 414 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 CCT7Q99832 543 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 HPS4Q9NQG7 708 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 INTS7Q9NVH2 962 aaKnown RBP14.15□□□□□ -0.14
VRK3-217ENST00000599538 EGFL7Q9UHF1 273 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 DPP7Q9UHL4 492 aa14.15□□□□□ -0.14
VRK3-217ENST00000599538 EPOPA6NHQ4 379 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 CCDC154A6NI56 674 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 GFYI3L273 518 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 K7ESM1 405 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 TSPAN6O43657 245 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 SLC2A4P14672 509 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 SOX11P35716 441 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 PREPP48147 710 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 DGKQP52824 942 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 RPL38P63173 70 aaKnown RBP14.14□□□□□ -0.15
VRK3-217ENST00000599538 EMX2Q04743 252 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 GRIK2Q13002 908 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 NFYCQ13952 458 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 KCNC3Q14003 757 aa14.14□□□□□ -0.15
VRK3-217ENST00000599538 ADGRE1Q14246 886 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms