RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 GSAPA4D1B5 854 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 RCCD1A6NED2 376 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 C2orf81A6NN90 581 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 MEN1O00255 615 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 LDB2O43679 373 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ANXA9O76027 345 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 CDH3P22223 829 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 CYLC1P35663 651 aaPredicted RBP14.25□□□□□ -0.13
IRF3-223ENST00000599223 PREPP48147 710 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 LMAN1P49257 510 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ITGA1P56199 1179 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 RPS15P62841 145 aaKnown RBP14.25□□□□□ -0.13
IRF3-223ENST00000599223 SPARCL1Q14515 664 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 PTCHD3Q3KNS1 767 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ANKRD20A2Q5SQ80 823 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ANKRD20A1Q5TYW2 823 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ANKRD20A3Q5VUR7 823 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ITPRIPL1Q6GPH6 555 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ARMC6Q6NXE6 501 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 AADACL2Q6P093 401 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 CARFQ8N187 725 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 Q8NA96 180 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ACVR1CQ8NER5 493 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 CPT1CQ8TCG5 803 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 ZFPM2Q8WW38 1151 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 SEC14L1Q92503 715 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 DNAJC1Q96KC8 554 aaKnown RBP14.25□□□□□ -0.13
IRF3-223ENST00000599223 LRFN5Q96NI6 719 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 HGH1Q9BTY7 390 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 PITPNM3Q9BZ71 974 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 FARSAQ9Y285 508 aaKnown RBP14.25□□□□□ -0.13
IRF3-223ENST00000599223 PCDHGA9Q9Y5G4 932 aaKnown RBP14.25□□□□□ -0.13
IRF3-223ENST00000599223 PCM1Q15154 2024 aa14.25□□□□□ -0.13
IRF3-223ENST00000599223 IGLV3-16A0A075B6K0 115 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 C5orf60A6NFR6 353 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 TTLL8A6PVC2 850 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 TMEM150CB9EJG8 249 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 CEACAM4O75871 244 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 PDHA2P29803 388 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 CTNNA1P35221 906 aaKnown RBP14.24□□□□□ -0.13
IRF3-223ENST00000599223 CCL11P51671 97 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 PDE1BQ01064 536 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 TMTC4Q5T4D3 741 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 CDKL3Q8IVW4 592 aaPredicted RBP14.24□□□□□ -0.13
IRF3-223ENST00000599223 SYTL1Q8IYJ3 562 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 FDCSPQ8NFU4 85 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 OR52E1Q8NGJ3 308 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 OR8K5Q8NH50 307 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 LCN9Q8WX39 176 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 CPT1BQ92523 772 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 SPATA13Q96N96 652 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 NUDT9Q9BW91 350 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 SRMSQ9H3Y6 488 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 XKR8Q9H6D3 395 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 ACSS2Q9NR19 701 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 C1GALT1Q9NS00 363 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 TCFL5Q9UL49 500 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 SNX7Q9UNH6 387 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 PCDHA13Q9Y5I0 950 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 NOTCH2Q04721 2471 aa14.24□□□□□ -0.13
IRF3-223ENST00000599223 TRBV5-4A0A0C4DH59 114 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 CCDC66A2RUB6 948 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 KLHL33A6NCF5 533 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 KIF2AO00139 706 aaPredicted RBP14.23□□□□□ -0.13
IRF3-223ENST00000599223 KCNN4O15554 427 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 HCRTR1O43613 425 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 CCDC175P0C221 793 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 RBP3P10745 1247 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 ATP1B2P14415 290 aaPredicted RBP14.23□□□□□ -0.13
IRF3-223ENST00000599223 ITGALP20701 1170 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 NDUFS1P28331 727 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 PRDX3P30048 256 aaKnown RBP14.23□□□□□ -0.13
IRF3-223ENST00000599223 MC4RP32245 332 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 EIF3EP60228 445 aaKnown RBP14.23□□□□□ -0.13
IRF3-223ENST00000599223 PRKAA1Q13131 559 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 CCDC181Q5TID7 509 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 ZNF385CQ66K41 422 aaPredicted RBP14.23□□□□□ -0.13
IRF3-223ENST00000599223 CDHR3Q6ZTQ4 885 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 SNX20Q7Z614 316 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 TRIM73Q86UV7 250 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 TMEM151BQ8IW70 566 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 KLHDC8BQ8IXV7 354 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 CCDC170Q8IYT3 715 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 TXLNBQ8N3L3 684 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 ZBTB2Q8N680 514 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 CLDN19Q8N6F1 224 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 PHC3Q8NDX5 983 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 ALG3Q92685 438 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 ULK4Q96C45 1275 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 CLIP3Q96DZ5 547 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 DCUN1D1Q96GG9 259 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 COPS8Q99627 209 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 TBL1YQ9BQ87 522 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 CCM2Q9BSQ5 444 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 NLNQ9BYT8 704 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 OSBPL8Q9BZF1 889 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 ACTR5Q9H9F9 607 aaPredicted RBP14.23□□□□□ -0.13
IRF3-223ENST00000599223 ICKQ9UPZ9 632 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 MAP4K5Q9Y4K4 846 aa14.23□□□□□ -0.13
IRF3-223ENST00000599223 COLEC10Q9Y6Z7 277 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms