RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 PRR19A6NJB7 356 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PSIP1O75475 530 aaKnown RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 CATP04040 527 aaKnown RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 ENO2P09104 434 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 SLC35G4P0C7Q5 338 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 MTHFD2P13995 350 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 CYP2A7P20853 494 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 BLKP51451 505 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 AFF3P51826 1226 aaKnown RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 NFKB2Q00653 900 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 CHI3L2Q15782 390 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PHKG1Q16816 387 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 RASGRP3Q8IV61 690 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 SLC22A9Q8IVM8 553 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 FBXO39Q8N4B4 442 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 CFAP61Q8NHU2 1237 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 RAB3IL1Q8TBN0 382 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 DLG3Q92796 817 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 SKA1Q96BD8 255 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 SLC12A9Q9BXP2 914 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 TMEM168Q9H0V1 697 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 RDH14Q9HBH5 336 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PARVBQ9HBI1 364 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 CD274Q9NZQ7 290 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 TMCO1Q9UM00 188 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 FANCMQ8IYD8 2048 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 NCF1BA6NI72 391 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 NCF1CA8MVU1 366 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 GFYI3L273 518 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 IFRD1O00458 451 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 VILLO15195 856 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 FFAR2O15552 330 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 SNX2O60749 519 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 TRIM13O60858 407 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 IPO13O94829 963 aaKnown RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 S100BP04271 92 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 FGF3P11487 239 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 NCF1P14598 390 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 IDSP22304 550 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 RPL10P27635 214 aaKnown RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 LSP1P33241 339 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 CLCNKAP51800 687 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PRKAA2P54646 552 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 NXPH1P58417 271 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 CTBSQ01459 385 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 ASPHQ12797 758 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 TCEA2Q15560 299 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PFKFB4Q16877 469 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 ZNF542PQ5EBM4 170 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 ZCCHC23Q6ZST2 131 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 SPATS2Q86XZ4 545 aaKnown RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 PHACTR4Q8IZ21 702 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PTGR2Q8N8N7 351 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 ZBTB44Q8NCP5 570 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 ZNF75CPQ92670 426 aaPredicted RBP14.32□□□□□ -0.12
VRK3-212ENST00000596814 PHF21BQ96EK2 531 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 RMDN2Q96LZ7 410 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 TRIM54Q9BYV2 358 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 WWP1Q9H0M0 922 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 MANSC1Q9H8J5 431 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 C11orf16Q9NQ32 467 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 DNAJC28Q9NX36 388 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 NCKIPSDQ9NZQ3 722 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PSMD13Q9UNM6 376 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PDE10AQ9Y233 779 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 ST14Q9Y5Y6 855 aa14.32□□□□□ -0.12
VRK3-212ENST00000596814 PDZK1P1A8MUH7 402 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 ARHGEF33A8MVX0 844 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 H2AFYO75367 372 aaKnown RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 GUCA1CO95843 209 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 GNSP15586 552 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 AK4P27144 223 aaPredicted RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 MAP4P27816 1152 aaKnown RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 ACADLP28330 430 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 ACTR1BP42025 376 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 BDKRB1P46663 353 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 RPIAP49247 311 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 CSNK1EP49674 416 aaKnown RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 C21orf59P57076 290 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 DNAJB13P59910 316 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 ACTR1AP61163 376 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 CBX1P83916 185 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 ILF3Q12906 894 aaKnown RBP eCLIP14.31□□□□□ -0.12
VRK3-212ENST00000596814 TEAD4Q15561 434 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 UNC5DQ6UXZ4 953 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 RGS9BPQ6ZS82 235 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 RAB44Q7Z6P3 723 aaPredicted RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 PDPRQ8NCN5 879 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 MCOLN3Q8TDD5 553 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 ZC3H10Q96K80 434 aaKnown RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 EGFL8Q99944 293 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 ZDHHC5Q9C0B5 715 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 TCEAL2Q9H3H9 227 aaPredicted RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 SUSD2Q9UGT4 822 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 APOBEC3BQ9UH17 382 aaKnown RBP14.31□□□□□ -0.12
VRK3-212ENST00000596814 KLF15Q9UIH9 416 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 PCDHGA2Q9Y5H1 932 aa14.31□□□□□ -0.12
VRK3-212ENST00000596814 SDK1Q7Z5N4 2213 aa14.3□□□□□ -0.12
VRK3-212ENST00000596814 A0A1B0GTW7 788 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms