RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 OR1L3Q8NH93 324 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 HM13Q8TCT9 377 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 ULK4Q96C45 1275 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 SGSM3Q96HU1 749 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 RBM41Q96IZ5 413 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 QKIQ96PU8 341 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 NUDT9Q9BW91 350 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 HEMGNQ9BXL5 484 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 SLC29A3Q9BZD2 475 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 KLHL25Q9H0H3 589 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 GOLPH3Q9H4A6 298 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 CASS4Q9NQ75 786 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 PCMTD2Q9NV79 361 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 GPR83Q9NYM4 423 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 POMT2Q9UKY4 750 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 INTUQ9ULD6 942 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 USP9XQ93008 2570 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 C17orf113A0A1B0GUU1 675 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 A1L4Q6 167 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 C9J4A7 227 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 E7EQ34 232 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 BTN3A3O00478 584 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 BTN3A1O00481 513 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 SGTAO43765 313 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 MFAP3LO75121 409 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 CEACAM4O75871 244 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 ATP1B2P14415 290 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 ST6GAL1P15907 406 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 ITGALP20701 1170 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 OTX2P32243 289 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 RORAP35398 523 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 MAGEA1P43355 309 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 PRLHRP49683 370 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 RRADP55042 308 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 ITGA1P56199 1179 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 XIAPP98170 497 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 OLIG2Q13516 323 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 RAPSNQ13702 412 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 TCEAL1Q15170 157 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 KYNUQ16719 465 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 PRR30Q53SZ7 412 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 RANBP10Q6VN20 620 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 SNX20Q7Z614 316 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 RAB43Q86YS6 212 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 HPS6Q86YV9 775 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 VSTM4Q8IW00 320 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 KATNAL2Q8IYT4 538 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 ZBTB2Q8N680 514 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 PHC3Q8NDX5 983 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 PRR7Q8TB68 274 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 HEXDCQ8WVB3 486 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 N4BP2L2Q92802 583 aaPredicted RBP10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 COPS8Q99627 209 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 GBA3Q9H227 469 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 COG4Q9H9E3 785 aa10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 AAR2Q9Y312 384 aaKnown RBP10.25□□□□□ -0.77
CHMP2A-202ENST00000596708 PCSK5Q92824 1860 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 MACROD2A1Z1Q3 448 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 C2orf74A8MZ97 194 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 TCP11X1B4DZS4 312 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 APOC4-APOC2K7ER74 178 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 ZNF749O43361 778 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 LDB2O43679 373 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 APOC2P02655 101 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 CAPN1P07384 714 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 HBQ1P09105 142 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 PVRP15151 417 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 CTNNA2P26232 953 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 VARSP26640 1264 aaKnown RBP10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 PSMB4P28070 264 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 HADHAP40939 763 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 MARCKSL1P49006 195 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 PRKG2Q13237 762 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 MRPL49Q13405 166 aaKnown RBP10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 ATP1A4Q13733 1029 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 NCF4Q15080 339 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 ZRANB3Q5FWF4 1079 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 ANKRD20A2Q5SQ80 823 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 ANKRD20A1Q5TYW2 823 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 ANKRD20A3Q5VUR7 823 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 MLIPQ5VWP3 458 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 SLC6A19Q695T7 634 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 SARM1Q6SZW1 724 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 FAM198BQ6UWH4 519 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 BBS12Q6ZW61 710 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 AMIGO1Q86WK6 493 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 GPR135Q8IZ08 494 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 NXPE1Q8N323 547 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 RBMXL3Q8N7X1 1067 aaKnown RBP10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 OR52E1Q8NGJ3 308 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 PNPLA2Q96AD5 504 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 LRRC45Q96CN5 670 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 TRAPPC9Q96Q05 1148 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 NRTNQ99748 197 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 GORASP1Q9BQQ3 440 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 XKR8Q9H6D3 395 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 MVB12BQ9H7P6 319 aa10.24□□□□□ -0.77
CHMP2A-202ENST00000596708 VPS37BQ9H9H4 285 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms