RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SEC16AO15027 2179 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 OR6C74A6NCV1 312 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 MATN2O00339 956 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 PRMT5O14744 637 aaPredicted RBP12.69□□□□□ -0.38
USE1-207ENST00000596136 RAD1O60671 282 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 GPC4O75487 556 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 STK17BO94768 372 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 TMEM63AO94886 807 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 MAP4P27816 1152 aaKnown RBP12.69□□□□□ -0.38
USE1-207ENST00000596136 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 ABHD18Q0P651 414 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 KRT33BQ14525 404 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 KCTD19Q17RG1 926 aaPredicted RBP12.69□□□□□ -0.38
USE1-207ENST00000596136 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
USE1-207ENST00000596136 DNTTIP2Q5QJE6 756 aaKnown RBP12.69□□□□□ -0.38
USE1-207ENST00000596136 ANKRD22Q5VYY1 191 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 CYB5D1Q6P9G0 228 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 VASH2Q86V25 355 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 BPHLQ86WA6 291 aaPredicted RBP12.69□□□□□ -0.38
USE1-207ENST00000596136 CACNA2D3Q8IZS8 1091 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 NLGN4XQ8N0W4 816 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 D2HGDHQ8N465 521 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 PHC3Q8NDX5 983 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
USE1-207ENST00000596136 OR4E2Q8NGC2 313 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 LCN9Q8WX39 176 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 ELMO1Q92556 727 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
USE1-207ENST00000596136 MFSD3Q96ES6 412 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 FCRL4Q96PJ5 515 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 OR6C1Q96RD1 312 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 P2RY12Q9H244 342 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 ANAPC5Q9UJX4 755 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 POMT2Q9UKY4 750 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 CDYLQ9Y232 598 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 PCDHGA4Q9Y5G9 962 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 CFAP46Q8IYW2 2715 aa12.69□□□□□ -0.38
USE1-207ENST00000596136 FASNP49327 2511 aaKnown RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 COL6A6A6NMZ7 2263 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 MAGEB16A2A368 324 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 USP27XA6NNY8 438 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 ZNF185O15231 689 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 AVILO75366 819 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 SLCO2B1O94956 709 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 ZBTB11O95625 1053 aaPredicted RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 FOLR1P15328 257 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 TCP1P17987 556 aaKnown RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 RPS3P23396 243 aaKnown RBP eCLIP12.68□□□□□ -0.38
USE1-207ENST00000596136 AOAHP28039 575 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 CCR7P32248 378 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 MAGEA3P43357 314 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 VPS41P49754 854 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 KPNA2P52292 529 aaKnown RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 HSD11B2P80365 405 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 FOXM1Q08050 763 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 KIAA0930Q6ICG6 404 aaPredicted RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 LRRC6Q86X45 466 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 TBC1D21Q8IYX1 336 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 SLC22A15Q8IZD6 547 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 ADGRF3Q8IZF5 1079 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 NAT8LQ8N9F0 302 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 OR52E1Q8NGJ3 308 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 GRK7Q8WTQ7 553 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 ASZ1Q8WWH4 475 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 SLCO2A1Q92959 643 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 TCF12Q99081 682 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 SLC12A9Q9BXP2 914 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 PITPNM3Q9BZ71 974 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 SRMSQ9H3Y6 488 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 XAB2Q9HCS7 855 aaKnown RBP12.68□□□□□ -0.38
USE1-207ENST00000596136 C1GALT1Q9NS00 363 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 POLG2Q9UHN1 485 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 BTRCQ9Y297 605 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 SPTBP11277 2137 aa12.68□□□□□ -0.38
USE1-207ENST00000596136 GOLGA6L10A0A0M3HER8 536 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 FAM237BA0A1B0GVD1 139 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 UBA6A0AVT1 1052 aaPredicted RBP12.67□□□□□ -0.38
USE1-207ENST00000596136 SDR42E2A6NKP2 422 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 BTN3A3O00478 584 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 BTN3A1O00481 513 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 SPAG6O75602 509 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 VAPBO95292 243 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 ITGB2P05107 769 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 MSL3P1P0C860 447 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 TPBGLP0DKB5 382 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 LIFP15018 202 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 ZNF28P17035 718 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 POLR2CP19387 275 aaPredicted RBP12.67□□□□□ -0.38
USE1-207ENST00000596136 PRDX3P30048 256 aaKnown RBP12.67□□□□□ -0.38
USE1-207ENST00000596136 ADARP55265 1226 aaKnown RBP12.67□□□□□ -0.38
USE1-207ENST00000596136 ACY1Q03154 408 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 PRKAA1Q13131 559 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 TYSND1Q2T9J0 566 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 MRNIPQ6NTE8 343 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 ARMC6Q6NXE6 501 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 NAPRTQ6XQN6 538 aa12.67□□□□□ -0.38
USE1-207ENST00000596136 LDB1Q86U70 411 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms