RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TFGQ92734 400 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 ZNF778Q96MU6 729 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 OR6C1Q96RD1 312 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 CTRCQ99895 268 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 KIFC1Q9BW19 673 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 XAB2Q9HCS7 855 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 CHRAC1Q9NRG0 131 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 TREX1Q9NSU2 369 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 POLG2Q9UHN1 485 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 PCDHGA4Q9Y5G9 962 aa17.27■□□□□ 0.36
SHKBP1-204ENST00000594862 PIKFYVEQ9Y2I7 2098 aa17.27■□□□□ 0.35
SHKBP1-204ENST00000594862 OR6C74A6NCV1 312 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 PRMT5O14744 637 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 KPNA5O15131 536 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 CD3EAPO15446 510 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 KIF1CO43896 1103 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 PHF2O75151 1096 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 RPN2P04844 631 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 TCP1P17987 556 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SHMT2P34897 504 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 COILP38432 576 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 PREPP48147 710 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 TUBB3Q13509 450 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 KCNJ11Q14654 390 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 MRNIPQ6NTE8 343 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 VASH2Q86V25 355 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 PPP1R3BQ86XI6 285 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 RASGRP3Q8IV61 690 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 TBC1D21Q8IYX1 336 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 OR8K5Q8NH50 307 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 ASZ1Q8WWH4 475 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SLC39A7Q92504 469 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 PANX3Q96QZ0 392 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 CARD6Q9BX69 1037 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 ULBP3Q9BZM4 244 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SPRY4Q9C004 299 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SYTL2Q9HCH5 934 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SAMD15Q9P1V8 674 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 GNPTGQ9UJJ9 305 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 POMT2Q9UKY4 750 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 RARRES3Q9UL19 164 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SNX12Q9UMY4 172 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SOX13Q9UN79 622 aa17.26■□□□□ 0.35
SHKBP1-204ENST00000594862 SLC5A10A0PJK1 596 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 DLGAP3O95886 979 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 APOA4P06727 396 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 MGAT1P26572 445 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 DNAJC21Q5F1R6 531 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 SDCCAG8Q86SQ7 713 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 AMIGO1Q86WK6 493 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 OTUD6BQ8N6M0 293 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 MCUQ8NE86 351 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 OR4E2Q8NGC2 313 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 OR52E1Q8NGJ3 308 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 JPH3Q8WXH2 748 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 TTC9Q92623 222 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 MS4A14Q96JA4 679 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 MAP3K3Q99759 626 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 AP1M1Q9BXS5 423 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 KCNF1Q9H3M0 494 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 GPN2Q9H9Y4 310 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 FANCEQ9HB96 536 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 APMAPQ9HDC9 416 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 C1GALT1Q9NS00 363 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 ASF1AQ9Y294 204 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 BTRCQ9Y297 605 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 VPS9D1Q9Y2B5 631 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 MRFAP1Q9Y605 127 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 PRSS21Q9Y6M0 314 aa17.25■□□□□ 0.35
SHKBP1-204ENST00000594862 IGHV5-51A0A0C4DH38 117 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 MAGEB16A2A368 324 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 ZNF891A8MT65 544 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 C2orf74A8MZ97 194 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 NDUFS3O75489 264 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 RPS3P23396 243 aaKnown RBP eCLIP17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 PDHA2P29803 388 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 VPS41P49754 854 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 PPP1CAP62136 330 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 SH3BP2P78314 561 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 MC1RQ01726 317 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 TRIP13Q15645 432 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 PTRHD1Q6GMV3 140 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 KIAA0930Q6ICG6 404 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 TTC27Q6P3X3 843 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 C6orf15Q6UXA7 325 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 D2HGDHQ8N465 521 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 GSDMBQ8TAX9 411 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 STAMBPL1Q96FJ0 436 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 PDLIM2Q96JY6 352 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 TCF12Q99081 682 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 HGH1Q9BTY7 390 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 SYBUQ9NX95 663 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 ATMQ13315 3056 aa17.24■□□□□ 0.35
SHKBP1-204ENST00000594862 CFAP46Q8IYW2 2715 aa17.23■□□□□ 0.35
SHKBP1-204ENST00000594862 GSAPA4D1B5 854 aa17.23■□□□□ 0.35
SHKBP1-204ENST00000594862 H3BMM5 538 aa17.23■□□□□ 0.35
SHKBP1-204ENST00000594862 OR1I1O60431 355 aa17.23■□□□□ 0.35
SHKBP1-204ENST00000594862 LIFP15018 202 aa17.23■□□□□ 0.35
SHKBP1-204ENST00000594862 POLR2CP19387 275 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-204ENST00000594862 CDH3P22223 829 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms