RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TFB2MQ9H5Q4 396 aaKnown RBP22.83■■□□□ 1.25
LSM4-204ENST00000594828 LZTFL1Q9NQ48 299 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 LHX9Q9NQ69 397 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 PAK5Q9P286 719 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 KCND3Q9UK17 655 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 PRSS21Q9Y6M0 314 aa22.83■■□□□ 1.25
LSM4-204ENST00000594828 GCN1Q92616 2671 aaKnown RBP22.83■■□□□ 1.24
LSM4-204ENST00000594828 LIN7AO14910 233 aaPredicted RBP22.82■■□□□ 1.24
LSM4-204ENST00000594828 KATNA1O75449 491 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 NTRK1P04629 796 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 CCDC175P0C221 793 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 CDH3P22223 829 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 ADRA1DP25100 572 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 KCNAB2Q13303 367 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 CCNG2Q16589 344 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 TSTD2Q5T7W7 516 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 LYPLAL1Q5VWZ2 237 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 FBXO38Q6PIJ6 1188 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 PACS1Q6VY07 963 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 OR13J1Q8NGT2 312 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 TTC1Q99614 292 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 CASS4Q9NQ75 786 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 C1GALT1Q9NS00 363 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 KCND1Q9NSA2 647 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 SOHLH2Q9NX45 425 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 TUBD1Q9UJT1 453 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 POMT2Q9UKY4 750 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 RIMKLBQ9ULI2 386 aa22.82■■□□□ 1.24
LSM4-204ENST00000594828 ZNF462Q96JM2 2506 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 GSAPA4D1B5 854 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 SLC9B1P1A6NJY1 282 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 TERTO14746 1132 aaKnown RBP22.81■■□□□ 1.24
LSM4-204ENST00000594828 FTH1P02794 183 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 APRTP07741 180 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 NFKB2Q00653 900 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 PRKG2Q13237 762 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 GPR19Q15760 415 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 ATP1A1-AS1Q5TC04 95 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 ZNF662Q6ZS27 426 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 NLRP9Q7RTR0 991 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 GLIS1Q8NBF1 620 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 OR52E1Q8NGJ3 308 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 APOBEC4Q8WW27 367 aaKnown RBP22.81■■□□□ 1.24
LSM4-204ENST00000594828 ELMO1Q92556 727 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 SLC2A6Q9UGQ3 507 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 BTRCQ9Y297 605 aa22.81■■□□□ 1.24
LSM4-204ENST00000594828 BTN3A3O00478 584 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 ZIC2O95409 532 aaPredicted RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 GOT2P00505 430 aaKnown RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 OR56A5P0C7T3 313 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 ZSCAN5DPP0CG00 497 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 PRDX3P30048 256 aaKnown RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 RPL22P35268 128 aaKnown RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 DNASE1L3Q13609 305 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 BOP1Q14137 746 aaKnown RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 ERV3-1Q14264 604 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 BRD3Q15059 726 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 SIX1Q15475 284 aaPredicted RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 AFTPHQ6ULP2 937 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 AMIGO1Q86WK6 493 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 OR6P1Q8NGX9 317 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 OR8K5Q8NH50 307 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 ZNF501Q96CX3 271 aaPredicted RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 ZNF778Q96MU6 729 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 NRTNQ99748 197 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 DRG1Q9Y295 367 aaKnown RBP22.8■■□□□ 1.24
LSM4-204ENST00000594828 PCDHGA6Q9Y5G7 932 aa22.8■■□□□ 1.24
LSM4-204ENST00000594828 BTN3A1O00481 513 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 SCRG1O75711 98 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 ACVR1Q04771 509 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 DRICH1Q6PGQ1 229 aaPredicted RBP22.79■■□□□ 1.24
LSM4-204ENST00000594828 TMEM126BQ8IUX1 230 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 LRRC8AQ8IWT6 810 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 OR4L1Q8NH43 312 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 CT55Q8WUE5 264 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 HGH1Q9BTY7 390 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 TLR10Q9BXR5 811 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 TCAF1Q9Y4C2 921 aa22.79■■□□□ 1.24
LSM4-204ENST00000594828 C21orf140B9A014 251 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 F8W8V4 182 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 MAP3K7O43318 606 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 SUV39H1O43463 412 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 OR1I1O60431 355 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 CPNE3O75131 537 aaKnown RBP22.78■■□□□ 1.24
LSM4-204ENST00000594828 CREG1O75629 220 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 PRAMEP78395 509 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 PLOD1Q02809 727 aaPredicted RBP22.78■■□□□ 1.24
LSM4-204ENST00000594828 FASTKD1Q53R41 847 aaKnown RBP22.78■■□□□ 1.24
LSM4-204ENST00000594828 NAPRTQ6XQN6 538 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 ATG14Q6ZNE5 492 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 PPHLN1Q8NEY8 458 aaKnown RBP22.78■■□□□ 1.24
LSM4-204ENST00000594828 MAIP1Q8WWC4 291 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 PEX13Q92968 403 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 XKR8Q9H6D3 395 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 AKIRIN1Q9H9L7 192 aaPredicted RBP22.78■■□□□ 1.24
LSM4-204ENST00000594828 FANCEQ9HB96 536 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 LATS2Q9NRM7 1088 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 ASF1AQ9Y294 204 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 ZKSCAN5Q9Y2L8 839 aa22.78■■□□□ 1.24
LSM4-204ENST00000594828 SLC5A10A0PJK1 596 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms