RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 ARCN1P48444 511 aaKnown RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 CYP4F2P78329 520 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 CRADDP78560 199 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 BOP1Q14137 746 aaKnown RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 KCNAB1Q14722 419 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 BRD3Q15059 726 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 TRIP13Q15645 432 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 TPSAB1Q15661 275 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 TMTC4Q5T4D3 741 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 C6orf15Q6UXA7 325 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 ZNF534Q76KX8 674 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 BPHLQ86WA6 291 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 UNC5BQ8IZJ1 945 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 RASGEF1CQ8N431 466 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 PHC3Q8NDX5 983 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 OR52E1Q8NGJ3 308 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 MAGOHBQ96A72 148 aaKnown RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 STAMBPL1Q96FJ0 436 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 MED8Q96G25 268 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 SLC45A3Q96JT2 553 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 SLC12A9Q9BXP2 914 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 CATSPERZQ9NTU4 200 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 LNPEPQ9UIQ6 1025 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 RARRES3Q9UL19 164 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 TTC7AQ9ULT0 858 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 LOC101059948A0A1B0GTJ6 334 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 CD3EAPO15446 510 aaKnown RBP14.84□□□□□ -0.03
TRIM28-203ENST00000593582 SPAG6O75602 509 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 KIAA0754O94854 1291 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 EBLN1P0CF75 366 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 STAT5AP42229 794 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 TTPAP49638 278 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 KPNA2P52292 529 aaKnown RBP14.84□□□□□ -0.03
TRIM28-203ENST00000593582 SARNPP82979 210 aaKnown RBP14.84□□□□□ -0.03
TRIM28-203ENST00000593582 GPS1Q13098 491 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 PRKG2Q13237 762 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 LRRC8BQ6P9F7 803 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 AMIGO1Q86WK6 493 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 ZNF843Q8N446 348 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 D2HGDHQ8N465 521 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 GALNT6Q8NCL4 622 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 MS4A14Q96JA4 679 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 FCRL4Q96PJ5 515 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 HGH1Q9BTY7 390 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 AP1M1Q9BXS5 423 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 FGF21Q9NSA1 209 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 TREX1Q9NSU2 369 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 SOHLH2Q9NX45 425 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 POMT2Q9UKY4 750 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 ASF1AQ9Y294 204 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 RPS6KL1Q9Y6S9 549 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 BOD1L1Q8NFC6 3051 aa14.84□□□□□ -0.03
TRIM28-203ENST00000593582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.83□□□□□ -0.04
TRIM28-203ENST00000593582 SLC5A10A0PJK1 596 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 PGRMC1O00264 195 aaKnown RBP14.83□□□□□ -0.04
TRIM28-203ENST00000593582 MAP3K7O43318 606 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 KIF5CO60282 957 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 MT-ND3P03897 115 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 CCNYL3P0C7X3 344 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 CDH3P22223 829 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 MGAT1P26572 445 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 VPS41P49754 854 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 TERF1P54274 439 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 TUBB4BP68371 445 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 TUBB2AQ13885 445 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 SEMA3AQ14563 771 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 TBR1Q16650 682 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 NAPRTQ6XQN6 538 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 REXO1L1PQ8IX06 675 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 TBC1D21Q8IYX1 336 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 RNF31Q96EP0 1072 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 TUBB2BQ9BVA1 445 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 C1GALT1Q9NS00 363 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 POLG2Q9UHN1 485 aa14.83□□□□□ -0.04
TRIM28-203ENST00000593582 PIEZO2Q9H5I5 2752 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 TCRBV7S3A2A0A539 114 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 SLC9B1P1A6NJY1 282 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 C2orf74A8MZ97 194 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 BHMG1C9JSJ3 638 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 BTN3A3O00478 584 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 PRMT5O14744 637 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 KDM1AO60341 852 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 KRT14P02533 472 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 ITGB6P18564 788 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 ACADLP28330 430 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 NMBRP28336 390 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 PRDX3P30048 256 aaKnown RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 DLSTP36957 453 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 CSE1LP55060 971 aaKnown RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 MC1RQ01726 317 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 HSPA14Q0VDF9 509 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 KCNJ11Q14654 390 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 KCTD19Q17RG1 926 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 LINC00303Q3SY05 128 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 PWWP2BQ6NUJ5 590 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 TTC27Q6P3X3 843 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 BORAQ6PGQ7 559 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 CCDC137Q6PK04 289 aaKnown RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 LDB1Q86U70 411 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms