RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PREPP48147 710 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 MRPL49Q13405 166 aaKnown RBP15.87■□□□□ 0.13
LIG1-205ENST00000593425 ZNF658BQ4V348 819 aaPredicted RBP15.87■□□□□ 0.13
LIG1-205ENST00000593425 BBS12Q6ZW61 710 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 RCOR2Q8IZ40 523 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 NXPE1Q8N323 547 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 RBMXL3Q8N7X1 1067 aaKnown RBP15.87■□□□□ 0.13
LIG1-205ENST00000593425 LCN9Q8WX39 176 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 DCUN1D1Q96GG9 259 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 FERD3LQ96RJ6 166 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 CCM2Q9BSQ5 444 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 PITPNM3Q9BZ71 974 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 PCDHGB7Q9Y5F8 929 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 HEBP2Q9Y5Z4 205 aa15.87■□□□□ 0.13
LIG1-205ENST00000593425 CCDC66A2RUB6 948 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 TCP11X1B4DZS4 312 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 APOC4-APOC2K7ER74 178 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 DPM1O60762 260 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 APOC2P02655 101 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 MSL3P1P0C860 447 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 RALBP11234 206 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 ATP1B2P14415 290 aaPredicted RBP15.86■□□□□ 0.13
LIG1-205ENST00000593425 CDKN1CP49918 316 aaPredicted RBP15.86■□□□□ 0.13
LIG1-205ENST00000593425 ZNF140P52738 457 aaPredicted RBP15.86■□□□□ 0.13
LIG1-205ENST00000593425 RAPSNQ13702 412 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 ATP1A4Q13733 1029 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 NCF4Q15080 339 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 ZNF385CQ66K41 422 aaPredicted RBP15.86■□□□□ 0.13
LIG1-205ENST00000593425 SLC6A19Q695T7 634 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 ITPRIPL1Q6GPH6 555 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 GLIS1Q8NBF1 620 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 OR52E1Q8NGJ3 308 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 ULK4Q96C45 1275 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 RBM41Q96IZ5 413 aaKnown RBP15.86■□□□□ 0.13
LIG1-205ENST00000593425 TRAPPC9Q96Q05 1148 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 COPS8Q99627 209 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 SYTL2Q9HCH5 934 aa15.86■□□□□ 0.13
LIG1-205ENST00000593425 UTP20O75691 2785 aaKnown RBP15.86■□□□□ 0.13
LIG1-205ENST00000593425 C17orf113A0A1B0GUU1 675 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 PRSS56P0CW18 603 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 ITGALP20701 1170 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 PDHA2P29803 388 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 MAGEA1P43355 309 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 OTUD4Q01804 1114 aaKnown RBP15.85■□□□□ 0.13
LIG1-205ENST00000593425 EIF2S3LQ2VIR3 472 aaKnown RBP15.85■□□□□ 0.13
LIG1-205ENST00000593425 ANKRD20A2Q5SQ80 823 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 ANKRD20A1Q5TYW2 823 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 ANKRD20A3Q5VUR7 823 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 DENND5AQ6IQ26 1287 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 CDHR3Q6ZTQ4 885 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 SNX20Q7Z614 316 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 TMEM102Q8N9M5 508 aaPredicted RBP15.85■□□□□ 0.13
LIG1-205ENST00000593425 PHC3Q8NDX5 983 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 ACTL9Q8TC94 416 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 PNPLA2Q96AD5 504 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 FAM118BQ9BPY3 351 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 HGH1Q9BTY7 390 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 TFB2MQ9H5Q4 396 aaKnown RBP15.85■□□□□ 0.13
LIG1-205ENST00000593425 XKR8Q9H6D3 395 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 SLAMF7Q9NQ25 335 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 GPR83Q9NYM4 423 aa15.85■□□□□ 0.13
LIG1-205ENST00000593425 IGLV3-16A0A075B6K0 115 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 A1L4Q6 167 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 CFAP99D6REC4 459 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 E7EQ34 232 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 ZNF749O43361 778 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 LDB2O43679 373 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 CRTAMO95727 393 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 MC4RP32245 332 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 SPARCL1Q14515 664 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 C11orf63Q6NUN7 778 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 MED25Q71SY5 747 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 ADGRF3Q8IZF5 1079 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 DNAJC1Q96KC8 554 aaKnown RBP15.84■□□□□ 0.13
LIG1-205ENST00000593425 SMAD5Q99717 465 aaKnown RBP15.84■□□□□ 0.13
LIG1-205ENST00000593425 SLC7A5P2Q9GIP4 190 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 FAM60AQ9NP50 221 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 CASS4Q9NQ75 786 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 ZDHHC3Q9NYG2 299 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 ACTR10Q9NZ32 417 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 MAP10Q9P2G4 905 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 SERTAD3Q9UJW9 196 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 AAR2Q9Y312 384 aaKnown RBP15.84■□□□□ 0.13
LIG1-205ENST00000593425 CCDC88CQ9P219 2028 aa15.84■□□□□ 0.13
LIG1-205ENST00000593425 TRBV5-4A0A0C4DH59 114 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 MACROD2A1Z1Q3 448 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 C2orf74A8MZ97 194 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 C9J4A7 227 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 IFRD1O00458 451 aaPredicted RBP15.83■□□□□ 0.12
LIG1-205ENST00000593425 KCNN4O15554 427 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 HCRTR1O43613 425 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 KLF7O75840 302 aaPredicted RBP15.83■□□□□ 0.12
LIG1-205ENST00000593425 CBSLP0DN79 551 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 ACRV1P26436 265 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 OTX2P32243 289 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 CBSP35520 551 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 HADHAP40939 763 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 CD151P48509 253 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 RRADP55042 308 aa15.83■□□□□ 0.12
LIG1-205ENST00000593425 PRKG2Q13237 762 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms