RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 GPR33Q49SQ1 333 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 CPZQ66K79 652 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 HOOK3Q86VS8 718 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 TTC13Q8NBP0 860 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 TMEM121Q9BTD3 319 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 GPR87Q9BY21 358 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 TRIM55Q9BYV6 548 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 RBSNQ9H1K0 784 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 CHST8Q9H2A9 424 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 LRRC40Q9H9A6 602 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 SMARCAL1Q9NZC9 954 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 POMT2Q9UKY4 750 aa17.43■□□□□ 0.38
CIRBP-243ENST00000593128 FARSAQ9Y285 508 aaKnown RBP17.43■□□□□ 0.38
CIRBP-243ENST00000593128 AGAP14A8MT82 685 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 BTNL10A8MVZ5 291 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 BTN3A3O00478 584 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 PVRP15151 417 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 LMAN1P49257 510 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 CCL11P51671 97 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 MLLT10P55197 1068 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 ABRQ12979 859 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 IL10RAQ13651 578 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 UGT8Q16880 541 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 CCDC38Q502W7 563 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 FAM69BQ5VUD6 431 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 TCTN3Q6NUS6 607 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 SYVN1Q86TM6 617 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 LRRC57Q8N9N7 239 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 SLC38A9Q8NBW4 561 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 OR52E1Q8NGJ3 308 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 OR8K5Q8NH50 307 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 CPT1BQ92523 772 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 COL26A1Q96A83 441 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 MRFAP1L1Q96HT8 127 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 BAG1Q99933 345 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-243ENST00000593128 DESI2Q9BSY9 194 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 ARNT2Q9HBZ2 717 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 ACSS2Q9NR19 701 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 C1GALT1Q9NS00 363 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 NLE1Q9NVX2 485 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-243ENST00000593128 SNX7Q9UNH6 387 aa17.42■□□□□ 0.38
CIRBP-243ENST00000593128 R3HDM2Q9Y2K5 976 aaKnown RBP17.42■□□□□ 0.38
CIRBP-243ENST00000593128 C17orf113A0A1B0GUU1 675 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 OR51F1A6NGY5 319 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 MATN2O00339 956 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 ZNF189O75820 626 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-243ENST00000593128 ST6GAL1P15907 406 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 PRDX3P30048 256 aaKnown RBP17.41■□□□□ 0.38
CIRBP-243ENST00000593128 GDF10P55107 478 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 CACNG1Q06432 222 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 SEMA5AQ13591 1074 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 DBN1Q16643 649 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 P3H1Q32P28 736 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 SYTL3Q4VX76 610 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 LCN10Q6JVE6 187 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 NAPRTQ6XQN6 538 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 AMIGO1Q86WK6 493 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 PIANPQ8IYJ0 282 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 CARFQ8N187 725 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 ENDOVQ8N8Q3 282 aaKnown RBP17.41■□□□□ 0.38
CIRBP-243ENST00000593128 DNAAF3Q8N9W5 541 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 THAP4Q8WY91 577 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 SEC14L1Q92503 715 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 ELMO1Q92556 727 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 TFGQ92734 400 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-243ENST00000593128 N4BP2L2Q92802 583 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-243ENST00000593128 CDKN2AIPNLQ96HQ2 116 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 OR52A5Q9H2C5 316 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 BTRCQ9Y297 605 aa17.41■□□□□ 0.38
CIRBP-243ENST00000593128 TDRKHQ9Y2W6 561 aaKnown RBP17.41■□□□□ 0.38
CIRBP-243ENST00000593128 A0A0U1RQJ8 604 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 TCRBV7S2A1N4TA0A589 114 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 C2orf74A8MZ97 194 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 MEN1O00255 615 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 PDGFAP04085 211 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 MSNP26038 577 aaKnown RBP17.4■□□□□ 0.38
CIRBP-243ENST00000593128 GSDMDP57764 484 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 KIF5AQ12840 1032 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 BOP1Q14137 746 aaKnown RBP17.4■□□□□ 0.38
CIRBP-243ENST00000593128 PTCHD3Q3KNS1 767 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 KCTD11Q693B1 232 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 SYCE1Q8N0S2 351 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 OR1L3Q8NH93 324 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 STYXQ8WUJ0 223 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 ATG4AQ8WYN0 398 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 SLC25A23Q9BV35 468 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 MVB12BQ9H7P6 319 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 ACTR5Q9H9F9 607 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-243ENST00000593128 ACTR10Q9NZ32 417 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 COL12A1Q99715 3063 aa17.4■□□□□ 0.38
CIRBP-243ENST00000593128 IGLV3-16A0A075B6K0 115 aa17.39■□□□□ 0.37
CIRBP-243ENST00000593128 PSMD3O43242 534 aa17.39■□□□□ 0.37
CIRBP-243ENST00000593128 AP2A1O95782 977 aa17.39■□□□□ 0.37
CIRBP-243ENST00000593128 RECKO95980 971 aa17.39■□□□□ 0.37
CIRBP-243ENST00000593128 GAS8O95995 478 aa17.39■□□□□ 0.37
CIRBP-243ENST00000593128 PTGIRP43119 386 aa17.39■□□□□ 0.37
CIRBP-243ENST00000593128 PGDP52209 483 aa17.39■□□□□ 0.37
CIRBP-243ENST00000593128 CSE1LP55060 971 aaKnown RBP17.39■□□□□ 0.37
CIRBP-243ENST00000593128 UBAP2LQ14157 1087 aaKnown RBP17.39■□□□□ 0.37
CIRBP-243ENST00000593128 PLEKHS1Q5SXH7 462 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms