RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 HK3P52790 923 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 GYS2P54840 703 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 SLC12A2P55011 1212 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 USP10Q14694 798 aaKnown RBP11.68□□□□□ -0.54
DDX39A-219ENST00000592927 SUZ12Q15022 739 aaKnown RBP11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ZKSCAN8Q15776 578 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-219ENST00000592927 DBN1Q16643 649 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ARHGAP40Q5TG30 622 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 CNSTQ6PJW8 725 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ADGRG6Q86SQ4 1221 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 GALNT13Q8IUC8 556 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 DENND1AQ8TEH3 1009 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 PDXPQ96GD0 296 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ATXN7L3BQ96GX2 97 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ELMO2Q96JJ3 720 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 POPDC3Q9HBV1 291 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ZDHHC3Q9NYG2 299 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 APOBEC3BQ9UH17 382 aaKnown RBP11.68□□□□□ -0.54
DDX39A-219ENST00000592927 ZNHIT2Q9UHR6 403 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 KLF15Q9UIH9 416 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 TLK1Q9UKI8 766 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 SLC39A10Q9ULF5 831 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 GRID1Q9ULK0 1009 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 PNMA8BQ9ULN7 279 aaPredicted RBP11.68□□□□□ -0.54
DDX39A-219ENST00000592927 SUFUQ9UMX1 484 aa11.68□□□□□ -0.54
DDX39A-219ENST00000592927 PTPN13Q12923 2485 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 A0A087X1B8 175 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 GOLGA8RI6L899 631 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 SCAMP1O15126 338 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 GRID2O43424 1007 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 NUAK1O60285 661 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 SHOX2O60902 331 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 SDC3O75056 442 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 DNAJC6O75061 913 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 FUCA1P04066 466 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 ZNF7P17097 686 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 RPS3P23396 243 aaKnown RBP eCLIP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 RPA3P35244 121 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 SLC26A3P40879 764 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 RAB10P61026 200 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 IL9RQ01113 521 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 SEMA3AQ14563 771 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 ITIH4Q14624 930 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 RTP5Q14D33 572 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 KHDC1Q4VXA5 237 aaKnown RBP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 PRRT3Q5FWE3 981 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 RAPH1Q70E73 1250 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 RBFAQ8N0V3 343 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 TCP10LQ8TDR4 215 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 DYDC1Q8WWB3 177 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 LPGAT1Q92604 370 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 MED8Q96G25 268 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 SCARF2Q96GP6 870 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 TSNARE1Q96NA8 513 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 CCDC68Q9H2F9 335 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 TCEAL2Q9H3H9 227 aaPredicted RBP11.67□□□□□ -0.54
DDX39A-219ENST00000592927 CCDC134Q9H6E4 229 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 CPNE5Q9HCH3 593 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 PCMTD2Q9NV79 361 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 ANKMY1Q9P2S6 941 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 SPASTQ9UBP0 616 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 VWA7Q9Y334 891 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 PLLPQ9Y342 182 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 PCDHB1Q9Y5F3 818 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 PTPRQQ9UMZ3 2332 aa11.67□□□□□ -0.54
DDX39A-219ENST00000592927 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 A0A096LPK6 155 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 H3BMM5 538 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 CHUKO15111 745 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 KMOO15229 486 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 PIAS2O75928 621 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ESR1P03372 595 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 C2P06681 752 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ATP1B2P14415 290 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 DGKAP23743 735 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 EPHA8P29322 1005 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 NSG1P42857 185 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 KPNA2P52292 529 aaKnown RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 TAS2R39P59534 338 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 GABPB1Q06547 395 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 BNIP3Q12983 259 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 MPP2Q14168 576 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ELOCQ15369 112 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 SHBQ15464 509 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 TCEA2Q15560 299 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 TSNAXIP1Q2TAA8 658 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 CCDC153Q494R4 210 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 PYCR3Q53H96 274 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 ZNF789Q5FWF6 425 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 HECTD2Q5U5R9 776 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 HHATQ5VTY9 493 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 TMEM220Q6QAJ8 160 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 CRTC3Q6UUV7 619 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 DET1Q7L5Y6 550 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 CMC1Q7Z7K0 106 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 LDB1Q86U70 411 aaPredicted RBP11.66□□□□□ -0.54
DDX39A-219ENST00000592927 LRRTM4Q86VH4 590 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 TRAPPC5Q8IUR0 188 aa11.66□□□□□ -0.54
DDX39A-219ENST00000592927 FSTL5Q8N475 847 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms