RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 LRRC39Q96DD0 335 aa17.24■□□□□ 0.35
DNMT1-215ENST00000588913 SGF29Q96ES7 293 aa17.24■□□□□ 0.35
DNMT1-215ENST00000588913 NSL1Q96IY1 281 aa17.24■□□□□ 0.35
DNMT1-215ENST00000588913 BTBD10Q9BSF8 475 aa17.24■□□□□ 0.35
DNMT1-215ENST00000588913 TSSK1BQ9BXA7 367 aa17.24■□□□□ 0.35
DNMT1-215ENST00000588913 DPEP2Q9H4A9 486 aa17.24■□□□□ 0.35
DNMT1-215ENST00000588913 TBC1D29Q9UFV1 150 aa17.24■□□□□ 0.35
DNMT1-215ENST00000588913 TRBV23OR9-2A0A075B6M9 112 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 EME2A4GXA9 379 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 FAM149AA5PLN7 773 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 A6NCN8 305 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 RFPL3O75679 317 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ACADSP16219 412 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ARNTP27540 789 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ILF3Q12906 894 aaKnown RBP eCLIP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ITGA9Q13797 1035 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 TBCCQ15814 346 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 FAM83HQ6ZRV2 1179 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 SNX20Q7Z614 316 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 C17orf82Q86X59 251 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ARL10Q8N8L6 244 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 IFI44Q8TCB0 444 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 SLC44A1Q8WWI5 657 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 MTBPQ96DY7 904 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 GSDMCQ9BYG8 508 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 TREX1Q9NSU2 369 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 SCHIP1Q9P0W5 487 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 MARCH4Q9P2E8 410 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 APPL1Q9UKG1 709 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 GRID1Q9ULK0 1009 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 DNAJC16Q9Y2G8 782 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 PRSS21Q9Y6M0 314 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 PIKFYVEQ9Y2I7 2098 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 HEATR9A2RTY3 570 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 A8MUI8 341 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 KRT37O76014 449 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 GOT2P00505 430 aaKnown RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 F7P08709 466 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ATP6V1C1P21283 382 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 HADHAP40939 763 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 MAGEA3P43357 314 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 PDE1BQ01064 536 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 NR0B2Q15466 257 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ZRANB3Q5FWF4 1079 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ATG16L1Q676U5 607 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 TMEM220Q6QAJ8 160 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 LDB1Q86U70 411 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 SERPINA9Q86WD7 417 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 LILRA3Q8N6C8 439 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 ZDHHC1Q8WTX9 485 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 MFSD3Q96ES6 412 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 C19orf43Q9BQ61 176 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 IQCGQ9H095 443 aaKnown RBP17.23■□□□□ 0.35
DNMT1-215ENST00000588913 NPHS2Q9NP85 383 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 MKS1Q9NXB0 559 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 PADI4Q9UM07 663 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 RNF215Q9Y6U7 377 aa17.23■□□□□ 0.35
DNMT1-215ENST00000588913 VEGFDO43915 354 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 SSTR1P30872 391 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 CDK16Q00536 496 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 INSM1Q01101 510 aaPredicted RBP17.22■□□□□ 0.35
DNMT1-215ENST00000588913 MSS51Q4VC12 460 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 PCID2Q5JVF3 399 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 LDLRAP1Q5SW96 308 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 FREM2Q5SZK8 3169 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 FNBP1LQ5T0N5 605 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 MTDHQ86UE4 582 aaKnown RBP17.22■□□□□ 0.35
DNMT1-215ENST00000588913 LRRTM4Q86VH4 590 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 CCDC74AQ96AQ1 378 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 FCRL3Q96P31 734 aaPredicted RBP17.22■□□□□ 0.35
DNMT1-215ENST00000588913 SIKE1Q9BRV8 207 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 SCNM1Q9BWG6 230 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 RMI1Q9H9A7 625 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 PRDM8Q9NQV8 689 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 IL1RAPL1Q9NZN1 696 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 CRLS1Q9UJA2 301 aa17.22■□□□□ 0.35
DNMT1-215ENST00000588913 APOBEC2Q9Y235 224 aaKnown RBP17.22■□□□□ 0.35
DNMT1-215ENST00000588913 CHD8Q9HCK8 2581 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 IGLV3-16A0A075B6K0 115 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 PRAMEF33A0A0G2JMD5 474 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 ZNF7P17097 686 aaPredicted RBP17.21■□□□□ 0.35
DNMT1-215ENST00000588913 ACRV1P26436 265 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 BBS9Q3SYG4 887 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 C14orf28Q4W4Y0 310 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 CAPRIN2Q6IMN6 1127 aaKnown RBP17.21■□□□□ 0.35
DNMT1-215ENST00000588913 SLC26A11Q86WA9 606 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 TRAPPC5Q8IUR0 188 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 SDR16C5Q8N3Y7 309 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 CLDN19Q8N6F1 224 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 MCUQ8NE86 351 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 PPHLN1Q8NEY8 458 aaKnown RBP17.21■□□□□ 0.35
DNMT1-215ENST00000588913 KIFC1Q9BW19 673 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 PCDHGA1Q9Y5H4 931 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 SLC30A1Q9Y6M5 507 aa17.21■□□□□ 0.35
DNMT1-215ENST00000588913 OR1I1O60431 355 aa17.2■□□□□ 0.34
DNMT1-215ENST00000588913 SNX2O60749 519 aa17.2■□□□□ 0.34
DNMT1-215ENST00000588913 SMNDC1O75940 238 aaKnown RBP eCLIP17.2■□□□□ 0.34
DNMT1-215ENST00000588913 NEFHP12036 1026 aa17.2■□□□□ 0.34
DNMT1-215ENST00000588913 ITGALP20701 1170 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms