RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 ITM2AO43736 263 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 FUCA1P04066 466 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 RPL6Q02878 288 aaKnown RBP30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 PLA2G4EQ3MJ16 856 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 ANKS6Q68DC2 871 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 ENPP7Q6UWV6 458 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 XKR5Q6UX68 686 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 Q6ZSR6 202 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 FRMD7Q6ZUT3 714 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 ABCA7Q8IZY2 2146 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 LILRA3Q8N6C8 439 aaPredicted RBP30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 C20orf27Q9GZN8 174 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 OR52A5Q9H2C5 316 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 FGF22Q9HCT0 170 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 UTP6Q9NYH9 597 aaKnown RBP30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 SLC23A2Q9UGH3 650 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 HAO1Q9UJM8 370 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 PTBP2Q9UKA9 531 aaKnown RBP30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 CA5BQ9Y2D0 317 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 PRKAB1Q9Y478 270 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 FANCMQ8IYD8 2048 aa30.34■■■□□ 2.45
CAPNS1-206ENST00000588815 SNX3O60493 162 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 MAP4P27816 1152 aaKnown RBP30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 PDHA2P29803 388 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 HNMTP50135 292 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 HK2P52789 917 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 PCBP2Q15366 365 aaKnown RBP eCLIP30.33■■■□□ 2.453e-9■□□□□ 10.3
CAPNS1-206ENST00000588815 UNC5DQ6UXZ4 953 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 CHST15Q7LFX5 561 aaPredicted RBP30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 PIWIL2Q8TC59 973 aaKnown RBP30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 SNX19Q92543 992 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 OR2M4Q96R27 311 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 SORT1Q99523 831 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 EGFL8Q99944 293 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 SIKE1Q9BRV8 207 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 TRIM55Q9BYV6 548 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 ILKAPQ9H0C8 392 aaPredicted RBP30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 RABEP2Q9H5N1 569 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 MOSPD1Q9UJG1 213 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 RAP2CQ9Y3L5 183 aa30.33■■■□□ 2.45
CAPNS1-206ENST00000588815 TP53BP1Q12888 1972 aaPredicted RBP30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 NCF1BA6NI72 391 aaPredicted RBP30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 NCF1CA8MVU1 366 aaPredicted RBP30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 SUPT7LO94864 414 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 RPS17P08708 135 aaKnown RBP30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 NCF1P14598 390 aaPredicted RBP30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 PRKAA1Q13131 559 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 LRP8Q14114 963 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 UNC50Q53HI1 259 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 PDZD3Q86UT5 571 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 UBTD2Q8WUN7 234 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 RHBDF1Q96CC6 855 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 ELAC2Q9BQ52 826 aaKnown RBP30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 GSTO2Q9H4Y5 243 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 ARL15Q9NXU5 204 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 KLHL14Q9P2G3 628 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 KLQ9UEF7 1012 aa30.32■■■□□ 2.44
CAPNS1-206ENST00000588815 TMEM221A6NGB7 291 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 M0R296 226 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 ACADLP28330 430 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 CLCNKAP51800 687 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 OVGP1Q12889 678 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 ABRQ12979 859 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 ARL13AQ5H913 290 aaPredicted RBP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 SPATA21Q7Z572 469 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 IQCHQ86VS3 1027 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 MAGEC3Q8TD91 643 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 CARS2Q9HA77 564 aaKnown RBP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 PRR19A6NJB7 356 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 MAP3K13O43283 966 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 LAMTOR5O43504 91 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 LYPLA1O75608 230 aaPredicted RBP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 ACP5P13686 325 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 EEF1DP29692 281 aaKnown RBP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 GNPDA1P46926 289 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 CGB2Q6NT52 195 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 FAM83HQ6ZRV2 1179 aaPredicted RBP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 WDR75Q8IWA0 830 aaKnown RBP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 OR13H1Q8NG92 308 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 OR1E3Q8WZA6 343 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 MRPL40Q9NQ50 206 aaKnown RBP30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 KLC4Q9NSK0 619 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 GPSM3Q9Y4H4 160 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 DGKBQ9Y6T7 804 aa30.31■■■□□ 2.44
CAPNS1-206ENST00000588815 IFRD1O00458 451 aaPredicted RBP30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 GUCA1CO95843 209 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 RPN2P04844 631 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 ARRB2P32121 409 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 GGT5P36269 586 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 C11orf74Q86VG3 221 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 WDR5BQ86VZ2 330 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 MFSD2AQ8NA29 543 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 ATL1Q8WXF7 558 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 KLHDC7BQ96G42 594 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 DUSP15Q9H1R2 295 aaPredicted RBP30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 ZNF395Q9H8N7 513 aaPredicted RBP30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 TM7SF3Q9NS93 570 aa30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 TRNAU1APQ9NX07 287 aaKnown RBP30.3■■■□□ 2.44
CAPNS1-206ENST00000588815 DNAJC16Q9Y2G8 782 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms