RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TCTN2Q96GX1 697 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 MFRPQ9BY79 579 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 C10orf88Q9H8K7 445 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 FANCEQ9HB96 536 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 SYTL2Q9HCH5 934 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 GPR83Q9NYM4 423 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 TRHDEQ9UKU6 1024 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 COLEC10Q9Y6Z7 277 aa17.87■□□□□ 0.45
CCDC43-204ENST00000588687 SNRNP200O75643 2136 aaKnown RBP17.87■□□□□ 0.45
CCDC43-204ENST00000588687 A1L4Q6 167 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 HACD1B0YJ81 288 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 ZNF185O15231 689 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 POLBP06746 335 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 PVRP15151 417 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 TNNT3P45378 269 aaPredicted RBP17.86■□□□□ 0.45
CCDC43-204ENST00000588687 PREPP48147 710 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 EIF2S3LQ2VIR3 472 aaKnown RBP17.86■□□□□ 0.45
CCDC43-204ENST00000588687 ODF2Q5BJF6 829 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 CDHR3Q6ZTQ4 885 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 CFAP206Q8IYR0 622 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 NXPE1Q8N323 547 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 CLIP3Q96DZ5 547 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 TRAPPC9Q96Q05 1148 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 CCM2Q9BSQ5 444 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 COG4Q9H9E3 785 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 INTUQ9ULD6 942 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 HEBP2Q9Y5Z4 205 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 CCDC88CQ9P219 2028 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 POLEQ07864 2286 aa17.86■□□□□ 0.45
CCDC43-204ENST00000588687 C17orf113A0A1B0GUU1 675 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 GSAPA4D1B5 854 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 HCRTR1O43613 425 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 CYP2A7P20853 494 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 RBL1P28749 1068 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 GABRA4P48169 554 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 CACNA1DQ01668 2161 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 PRKAA1Q13131 559 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 DENND5AQ6IQ26 1287 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 BBS12Q6ZW61 710 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 MRGPREQ86SM8 312 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 ADGRF3Q8IZF5 1079 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 OR52E1Q8NGJ3 308 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 LCN9Q8WX39 176 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 C19orf60Q96EN9 201 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 CCDC42Q96M95 316 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 C19orf43Q9BQ61 176 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 DPH2Q9BQC3 489 aaPredicted RBP17.85■□□□□ 0.45
CCDC43-204ENST00000588687 APOL2Q9BQE5 337 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 SRMSQ9H3Y6 488 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 TFB2MQ9H5Q4 396 aaKnown RBP17.85■□□□□ 0.45
CCDC43-204ENST00000588687 CASS4Q9NQ75 786 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 ERRFI1Q9UJM3 462 aaPredicted RBP17.85■□□□□ 0.45
CCDC43-204ENST00000588687 ALG6Q9Y672 507 aa17.85■□□□□ 0.45
CCDC43-204ENST00000588687 TRBV5-4A0A0C4DH59 114 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 C5orf60A6NFR6 353 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 A6NL46 340 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 C2orf81A6NN90 581 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 ZNF749O43361 778 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 KRT86O43790 486 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 CLDN1O95832 211 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 DDAH2O95865 285 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 LDLRP01130 860 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 PDHA2P29803 388 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 GEMP55040 296 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 RAPSNQ13702 412 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 GSE1Q14687 1217 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 VWA5B1Q5TIE3 1220 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 VSTM4Q8IW00 320 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 KLHDC8BQ8IXV7 354 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 KRT35Q92764 455 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 SNRNP40Q96DI7 357 aaKnown RBP17.84■□□□□ 0.45
CCDC43-204ENST00000588687 KLHL25Q9H0H3 589 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 SLAMF7Q9NQ25 335 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 CRLS1Q9UJA2 301 aa17.84■□□□□ 0.45
CCDC43-204ENST00000588687 APOC4-APOC2K7ER74 178 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 CCL22O00626 93 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 CNOT3O75175 753 aaKnown RBP17.83■□□□□ 0.44
CCDC43-204ENST00000588687 ANXA9O76027 345 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 APOC2P02655 101 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 ATP1B2P14415 290 aaPredicted RBP17.83■□□□□ 0.44
CCDC43-204ENST00000588687 PSMB4P28070 264 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 RRADP55042 308 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 BOP1Q14137 746 aaKnown RBP17.83■□□□□ 0.44
CCDC43-204ENST00000588687 ZIC1Q15915 447 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 CRB2Q5IJ48 1285 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 SNX20Q7Z614 316 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 TMEM151BQ8IW70 566 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 FLVCR1-AS1Q8TAF5 88 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 INPP5DQ92835 1189 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 ULK4Q96C45 1275 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 COPS8Q99627 209 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 BARD1Q99728 777 aaKnown RBP17.83■□□□□ 0.44
CCDC43-204ENST00000588687 DHRS4Q9BTZ2 278 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 SLC29A3Q9BZD2 475 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 FAM60AQ9NP50 221 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 ZNHIT6Q9NWK9 470 aaKnown RBP17.83■□□□□ 0.44
CCDC43-204ENST00000588687 C5AR2Q9P296 337 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 ICKQ9UPZ9 632 aa17.83■□□□□ 0.44
CCDC43-204ENST00000588687 CCDC66A2RUB6 948 aa17.82■□□□□ 0.44
CCDC43-204ENST00000588687 E7EQ34 232 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms