RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FBXO48Q5FWF7 155 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.05□□□□□ -0.64
VMP1-207ENST00000588131 LIPMQ5VYY2 423 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 METRNLQ641Q3 311 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 MBOAT1Q6ZNC8 495 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 ATG14Q6ZNE5 492 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 FRA10AC1Q70Z53 315 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 LPCAT2Q7L5N7 544 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SPATS2Q86XZ4 545 aaKnown RBP11.05□□□□□ -0.64
VMP1-207ENST00000588131 HID1Q8IV36 788 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 LRRC34Q8IZ02 419 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 RGL4Q8IZJ4 473 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 FBXO39Q8N4B4 442 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PTGR2Q8N8N7 351 aaPredicted RBP11.05□□□□□ -0.64
VMP1-207ENST00000588131 MFSD2AQ8NA29 543 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 CCL4L1Q8NHW4 92 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 FAM174AQ8TBP5 190 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 ASB11Q8WXH4 323 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 NELL1Q92832 810 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PHF21BQ96EK2 531 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 RMDN2Q96LZ7 410 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 ZNF317Q96PQ6 595 aaPredicted RBP11.05□□□□□ -0.64
VMP1-207ENST00000588131 TMEM237Q96Q45 408 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SLC12A9Q9BXP2 914 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 ZDHHC5Q9C0B5 715 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 WWP1Q9H0M0 922 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 TMEM168Q9H0V1 697 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 DPEP2Q9H4A9 486 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 OSGEPL1Q9H4B0 414 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 SLCO1B3Q9NPD5 702 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 NUDT4Q9NZJ9 180 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 CD274Q9NZQ7 290 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 KLF15Q9UIH9 416 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PSMD13Q9UNM6 376 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 PDE10AQ9Y233 779 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 WDR37Q9Y2I8 494 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 CACNA1IQ9P0X4 2223 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 VCANP13611 3396 aa11.05□□□□□ -0.64
VMP1-207ENST00000588131 KLHL33A6NCF5 533 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 ARHGEF33A8MVX0 844 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 KLF11O14901 512 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 FFAR2O15552 330 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 ITM2AO43736 263 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 KCNJ13O60928 360 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 LYPLA1O75608 230 aaPredicted RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 IPO13O94829 963 aaKnown RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 SIX3O95343 332 aaPredicted RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 GUCA1CO95843 209 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 SERPINE1P05121 402 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 ENO2P09104 434 aaPredicted RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 GFAPP14136 432 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 ITPKAP23677 461 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 AK4P27144 223 aaPredicted RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 RPL10P27635 214 aaKnown RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 CCR10P46092 362 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 CLCNKAP51800 687 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 NAGLUP54802 743 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 DNAJB13P59910 316 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 CTBSQ01459 385 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 PLOD1Q02809 727 aaPredicted RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 STX3Q13277 289 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 CCSMST1Q4G0I0 132 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 PMS2CLQ68D20 193 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 FAM47EQ6ZV65 393 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 RPS27LQ71UM5 84 aaKnown RBP11.04□□□□□ -0.64
VMP1-207ENST00000588131 PDZD3Q86UT5 571 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 TRIM42Q8IWZ5 723 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 PDPRQ8NCN5 879 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 PPP1R14CQ8TAE6 165 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 RAB3IL1Q8TBN0 382 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 C20orf27Q9GZN8 174 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 RABEP2Q9H5N1 569 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 RDH14Q9HBH5 336 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 ASB1Q9Y576 335 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 DGKBQ9Y6T7 804 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 THADAQ6YHU6 1953 aa11.04□□□□□ -0.64
VMP1-207ENST00000588131 TP53BP1Q12888 1972 aaPredicted RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 GMNCA6NCL1 334 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 STX16-NPEPL1H3BU86 382 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 TLR4O00206 839 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 STX16O14662 325 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 TAPBPO15533 448 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 SNX2O60749 519 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 C1orf105O95561 183 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 EML2O95834 649 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 TNFP01375 233 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 CELA2BP08218 269 aaPredicted RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 VIMP08670 466 aaKnown RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 SLC35G4P0C7Q5 338 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 SP9P0CG40 484 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 VCLP18206 1134 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 IMPDH1P20839 514 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 CYP2A7P20853 494 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 RPIAP49247 311 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 DHPSP49366 369 aaPredicted RBP11.03□□□□□ -0.64
VMP1-207ENST00000588131 AGTR2P50052 363 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 NXPH1P58417 271 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 SETDB1Q15047 1291 aa11.03□□□□□ -0.64
VMP1-207ENST00000588131 TUBB8Q3ZCM7 444 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms