RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ILKAPQ9H0C8 392 aaPredicted RBP9.98□□□□□ -0.81
APOC1-201ENST00000586638 OR2AG1Q9H205 316 aa9.98□□□□□ -0.81
APOC1-201ENST00000586638 COG4Q9H9E3 785 aa9.98□□□□□ -0.81
APOC1-201ENST00000586638 TMCO1Q9UM00 188 aa9.98□□□□□ -0.81
APOC1-201ENST00000586638 OARD1Q9Y530 152 aa9.98□□□□□ -0.81
APOC1-201ENST00000586638 ASB1Q9Y576 335 aa9.98□□□□□ -0.81
APOC1-201ENST00000586638 ZFYVE26Q68DK2 2539 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 TCRBV21S2A2A0A5A6 115 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 CCDC189A1A4V9 331 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 STX16-NPEPL1H3BU86 382 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 QSOX1O00391 747 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 UBFD1O14562 309 aaKnown RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 STX16O14662 325 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 RAD51BO15315 384 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 GRID2O43424 1007 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 NUAK1O60285 661 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 RNGTTO60942 597 aaKnown RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 ATG13O75143 517 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 MPC1LP0DKB6 136 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 CBSLP0DN79 551 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 ENO3P13929 434 aaPredicted RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 CBSP35520 551 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 IGFALSP35858 605 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 BDKRB1P46663 353 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 IDH3AP50213 366 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 RPL14P50914 215 aaKnown RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 ALDH18A1P54886 795 aaKnown RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 DPTQ07507 201 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 TMEM115Q12893 351 aaPredicted RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 GTF2H3Q13889 308 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 CCINQ13939 588 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 CCDC6Q16204 474 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 WSCD2Q2TBF2 565 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 BCL7AQ4VC05 210 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 EOGTQ5NDL2 527 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 PLEKHS1Q5SXH7 462 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 CYHR1Q6ZMK1 362 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 TRAPPC5Q8IUR0 188 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 TP53I13Q8NBR0 393 aaPredicted RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 PDPRQ8NCN5 879 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 TRPC4APQ8TEL6 797 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 ZNF483Q8TF39 744 aaPredicted RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 SKA2Q8WVK7 121 aaPredicted RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 GAB3Q8WWW8 586 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 DLG3Q92796 817 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 FAM131CQ96AQ9 280 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 SIPA1Q96FS4 1042 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 RILPQ96NA2 401 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 EGFL8Q99944 293 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 MYOCQ99972 504 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 SIKE1Q9BRV8 207 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 TMEM79Q9BSE2 394 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 NUF2Q9BZD4 464 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 ZCCHC2Q9C0B9 1178 aaKnown RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 NMUR2Q9GZQ4 415 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 KDM4CQ9H3R0 1056 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 FZD3Q9NPG1 666 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 MBNL1Q9NR56 388 aaKnown RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 WWOXQ9NZC7 414 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 KLHL42Q9P2K6 505 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 ATXN10Q9UBB4 475 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 PCTPQ9UKL6 214 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 MMP17Q9ULZ9 603 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 TMEM98Q9Y2Y6 226 aa9.97□□□□□ -0.81
APOC1-201ENST00000586638 RRP15Q9Y3B9 282 aaKnown RBP9.97□□□□□ -0.81
APOC1-201ENST00000586638 CCDC163A0A0D9SF12 145 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 GOLGA8QA0A0J9YX86 632 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 A0A1W2PQU0 124 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 GOLGA8OA6NCC3 632 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 KRT87PA6NCN2 255 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 GOLGA8NF8WBI6 632 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 EIF3FO00303 357 aaPredicted RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 MATN2O00339 956 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 PPP6CO00743 305 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 HDAC3O15379 428 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 FFAR2O15552 330 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 CDK14O94921 469 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 ZNF8P17098 575 aaPredicted RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 GABRG2P18507 467 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 MAT2AP31153 395 aaKnown RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 PXNP49023 591 aaPredicted RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 NCALDP61601 193 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 SHC2P98077 582 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 CDK3Q00526 305 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 COL9A2Q14055 689 aaPredicted RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 RBBP7Q16576 425 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 GALNTL6Q49A17 601 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 FBXO43Q4G163 708 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 LACTB2Q53H82 288 aaPredicted RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 STPG1Q5TH74 334 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 ANKS6Q68DC2 871 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 CLEC6AQ6EIG7 209 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 KIAA1161Q6NSJ0 714 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 PNCKQ6P2M8 343 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 EPGNQ6UW88 154 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 ADAMTSL4Q6UY14 1074 aa9.96□□□□□ -0.82
APOC1-201ENST00000586638 UBE2R2Q712K3 238 aaPredicted RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 YTHDF3Q7Z739 585 aaKnown RBP9.96□□□□□ -0.82
APOC1-201ENST00000586638 KBTBD6Q86V97 674 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms