RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 B8ZZF3 427 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 QSOX1O00391 747 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 LIN7AO14910 233 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-218ENST00000584669 MLNP12872 115 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 CYP4F2P78329 520 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 RPA4Q13156 261 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 PTK6Q13882 451 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 BOP1Q14137 746 aaKnown RBP20.21■□□□□ 0.83
TOP3A-218ENST00000584669 KRT33BQ14525 404 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 AARS2Q5JTZ9 985 aaKnown RBP20.21■□□□□ 0.83
TOP3A-218ENST00000584669 RNASEH2BQ5TBB1 312 aaKnown RBP20.21■□□□□ 0.83
TOP3A-218ENST00000584669 FAM92BQ6ZTR7 304 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 PPIL6Q8IXY8 311 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 KRT222Q8N1A0 295 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 OTUD6BQ8N6M0 293 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 IL22RA1Q8N6P7 574 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 EXD3Q8N9H8 876 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 SLCO2A1Q92959 643 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 NRTNQ99748 197 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 KCND1Q9NSA2 647 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 IL1RAPL1Q9NZN1 696 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 HEBP2Q9Y5Z4 205 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 COLEC10Q9Y6Z7 277 aa20.21■□□□□ 0.83
TOP3A-218ENST00000584669 SLC5A10A0PJK1 596 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 SDR42E2A6NKP2 422 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 PYCARD-AS1I3L0S3 204 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 IFRD1O00458 451 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-218ENST00000584669 DNALI1O14645 258 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-218ENST00000584669 SLC28A2O43868 658 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 ANKRD34CP0C6C1 535 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 PPARGP37231 505 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-218ENST00000584669 MAGEA3P43357 314 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 CD151P48509 253 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 TTPAP49638 278 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 SEPHS1P49903 392 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 CSE1LP55060 971 aaKnown RBP20.2■□□□□ 0.82
TOP3A-218ENST00000584669 NFATC3Q12968 1075 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 LINC00303Q3SY05 128 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 ANKS6Q68DC2 871 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 KIAA0930Q6ICG6 404 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-218ENST00000584669 ZNF449Q6P9G9 518 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 PRICKLE2Q7Z3G6 844 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 ZFPM2Q8WW38 1151 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 ZNF669Q96BR6 464 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-218ENST00000584669 RAB33BQ9H082 229 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 SAMD15Q9P1V8 674 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 EPHA6Q9UF33 1036 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 PCDHGA3Q9Y5H0 932 aa20.2■□□□□ 0.82
TOP3A-218ENST00000584669 FLNBO75369 2602 aaKnown RBP20.2■□□□□ 0.82
TOP3A-218ENST00000584669 FAM237BA0A1B0GVD1 139 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 B4E171 279 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-218ENST00000584669 BHMG1C9JSJ3 638 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-218ENST00000584669 RASSF9O75901 435 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 ITGB2P05107 769 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 FAM87AP0C7U9 286 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 NDUFS1P28331 727 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 CCR7P32248 378 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 TSPAN7P41732 249 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 ARCN1P48444 511 aaKnown RBP20.19■□□□□ 0.82
TOP3A-218ENST00000584669 SYTL3Q4VX76 610 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 DCAF12Q5T6F0 453 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 CACHD1Q5VU97 1274 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 TFGQ92734 400 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-218ENST00000584669 NKD1Q969G9 470 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 CTRCQ99895 268 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 DDA1Q9BW61 102 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 P2RY12Q9H244 342 aa20.19■□□□□ 0.82
TOP3A-218ENST00000584669 HEMK1Q9Y5R4 338 aaPredicted RBP20.19■□□□□ 0.82
TOP3A-218ENST00000584669 OR6C74A6NCV1 312 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 OR5K3A6NET4 321 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 PRMT5O14744 637 aaPredicted RBP20.18■□□□□ 0.82
TOP3A-218ENST00000584669 NDUFS3O75489 264 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 IVDP26440 423 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 ACADLP28330 430 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 PAFAH1B1P43034 410 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 MC2RQ01718 297 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 PRKG2Q13237 762 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 DHX34Q14147 1143 aaKnown RBP20.18■□□□□ 0.82
TOP3A-218ENST00000584669 ANKRD20A4Q4UJ75 823 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 IZUMO3Q5VZ72 239 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 ARMC3Q5W041 872 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 KLHL35Q6PF15 583 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 PRSS42Q7Z5A4 293 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 VRK3Q8IV63 474 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 CACNA2D3Q8IZS8 1091 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 ACVR1CQ8NER5 493 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 OR4E2Q8NGC2 313 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 ZDHHC12Q96GR4 267 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 SIGLEC10Q96LC7 697 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 TRIM51Q9BSJ1 452 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 HGH1Q9BTY7 390 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 CARD6Q9BX69 1037 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 ASPSCR1Q9BZE9 553 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 FAM117AQ9C073 453 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 ZNF768Q9H5H4 540 aaKnown RBP20.18■□□□□ 0.82
TOP3A-218ENST00000584669 APMAPQ9HDC9 416 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 HRASLS2Q9NWW9 162 aa20.18■□□□□ 0.82
TOP3A-218ENST00000584669 SIDT1Q9NXL6 827 aaKnown RBP20.18■□□□□ 0.82
TOP3A-218ENST00000584669 UBA6A0AVT1 1052 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms