RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TTPAP49638 278 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 CSE1LP55060 971 aaKnown RBP19.87■□□□□ 0.77
SS18-224ENST00000584083 KCNJ11Q14654 390 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 CYB5D1Q6P9G0 228 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 CES3Q6UWW8 571 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 ACTRT1Q8TDG2 376 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 RNF31Q96EP0 1072 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 TSSK1BQ9BXA7 367 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 ULBP3Q9BZM4 244 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 SPRY4Q9C004 299 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 SEMA5BQ9P283 1151 aa19.87■□□□□ 0.77
SS18-224ENST00000584083 TMEM184BQ9Y519 407 aaPredicted RBP19.87■□□□□ 0.77
SS18-224ENST00000584083 GSAPA4D1B5 854 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 ZNF185O15231 689 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 PHF2O75151 1096 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 LIFP15018 202 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 WT1P19544 449 aaPredicted RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 MAP4P27816 1152 aaKnown RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 PLOD1Q02809 727 aaPredicted RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 KCNAB1Q14722 419 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 CASC4Q6P4E1 433 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 TIPARPQ7Z3E1 657 aaKnown RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 KMT5CQ86Y97 462 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 LSM14AQ8ND56 463 aaKnown RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 OR52E1Q8NGJ3 308 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 KIAA1143Q96AT1 154 aaPredicted RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 SLC41A2Q96JW4 573 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 KIFC1Q9BW19 673 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 TRIT1Q9H3H1 467 aaKnown RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 MRM3Q9HC36 420 aaKnown RBP19.86■□□□□ 0.77
SS18-224ENST00000584083 PDE7BQ9NP56 450 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 ASF1AQ9Y294 204 aa19.86■□□□□ 0.77
SS18-224ENST00000584083 SLC5A10A0PJK1 596 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 TK2O00142 265 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 AVILO75366 819 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 NDUFS3O75489 264 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 VAPBO95292 243 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 FOLR1P15328 257 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 MAGEA6P43360 314 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 KPNA2P52292 529 aaKnown RBP19.85■□□□□ 0.77
SS18-224ENST00000584083 HSD11B2P80365 405 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 TUBB3Q13509 450 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 ANKRD22Q5VYY1 191 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 PTRHD1Q6GMV3 140 aaKnown RBP19.85■□□□□ 0.77
SS18-224ENST00000584083 AMIGO1Q86WK6 493 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 PPP1R3BQ86XI6 285 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 OR5AR1Q8NGP9 310 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 GRK7Q8WTQ7 553 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 CPT1BQ92523 772 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 TTC9Q92623 222 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 MFSD3Q96ES6 412 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 CARD6Q9BX69 1037 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 TFB2MQ9H5Q4 396 aaKnown RBP19.85■□□□□ 0.77
SS18-224ENST00000584083 GPN2Q9H9Y4 310 aaPredicted RBP19.85■□□□□ 0.77
SS18-224ENST00000584083 SAMD15Q9P1V8 674 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 RARRES3Q9UL19 164 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 SOX13Q9UN79 622 aa19.85■□□□□ 0.77
SS18-224ENST00000584083 USP27XA6NNY8 438 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 IQCF5A8MTL0 148 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 BHMG1C9JSJ3 638 aaPredicted RBP19.84■□□□□ 0.77
SS18-224ENST00000584083 MATN2O00339 956 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 CES2O00748 559 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 PRMT5O14744 637 aaPredicted RBP19.84■□□□□ 0.77
SS18-224ENST00000584083 ZBTB11O95625 1053 aaPredicted RBP19.84■□□□□ 0.77
SS18-224ENST00000584083 EBLN1P0CF75 366 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 FGF5P12034 268 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 ZNF28P17035 718 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 CDH3P22223 829 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 ACADLP28330 430 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 CCR7P32248 378 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 ACY1Q03154 408 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 HSPA14Q0VDF9 509 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 FBXO38Q6PIJ6 1188 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 MPP5Q8N3R9 675 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 ESX1Q8N693 406 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 PDLIM2Q96JY6 352 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 PPM1MQ96MI6 270 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 NRTNQ99748 197 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 XKR8Q9H6D3 395 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 SOHLH2Q9NX45 425 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 LNPEPQ9UIQ6 1025 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 POMT2Q9UKY4 750 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 TDRKHQ9Y2W6 561 aaKnown RBP19.84■□□□□ 0.77
SS18-224ENST00000584083 NEU2Q9Y3R4 380 aa19.84■□□□□ 0.77
SS18-224ENST00000584083 GOLGA8MH3BSY2 632 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 BTN3A3O00478 584 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 BTN3A1O00481 513 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 SPAG6O75602 509 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 KIAA0754O94854 1291 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 TMEM63AO94886 807 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 DLGAP3O95886 979 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 PRB1P04280 392 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 APOA4P06727 396 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 TCP1P17987 556 aaKnown RBP19.83■□□□□ 0.77
SS18-224ENST00000584083 FNTAP49354 379 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 CYP4F2P78329 520 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 ABHD18Q0P651 414 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 PPP1R7Q15435 360 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 TMTC4Q5T4D3 741 aa19.83■□□□□ 0.77
SS18-224ENST00000584083 MRNIPQ6NTE8 343 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms