RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 ANKHD1Q8IWZ3 2542 aaKnown RBP11.24□□□□□ -0.61
NUP85-224ENST00000583948 MYO7BQ6PIF6 2116 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 SMAPO00193 183 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 MATN3O15232 486 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 DPM1O60762 260 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 BANF1O75531 89 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 CCNYL3P0C7X3 344 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 NFKB1P19838 968 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 LHCGRP22888 699 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 GLRBP48167 497 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 GEMIN4P57678 1058 aaKnown RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 YBEYP58557 167 aaPredicted RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 IFI35P80217 286 aaPredicted RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 SRSF11Q05519 484 aaKnown RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 PDIA2Q13087 525 aaKnown RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 UAP1Q16222 522 aaPredicted RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 KYNUQ16719 465 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 PARP6Q2NL67 630 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 BBS9Q3SYG4 887 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 PYCR3Q53H96 274 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 TEX44Q53QW1 395 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 HP1BP3Q5SSJ5 553 aaPredicted RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 FAM92BQ6ZTR7 304 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 CENPUQ71F23 418 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 CHST15Q7LFX5 561 aaPredicted RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 SRLQ86TD4 932 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 FJX1Q86VR8 437 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 TTC30BQ8N4P2 665 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 VAT1Q99536 393 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 TXLNGYQ9BZA5 131 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 GBA3Q9H227 469 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 CDC42EP4Q9H3Q1 356 aaKnown RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 RETREG1Q9H6L5 497 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 VIPAS39Q9H9C1 493 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 SCHIP1Q9P0W5 487 aaPredicted RBP11.23□□□□□ -0.61
NUP85-224ENST00000583948 CCDC88CQ9P219 2028 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 SPTBP11277 2137 aa11.23□□□□□ -0.61
NUP85-224ENST00000583948 ZNF469Q96JG9 3925 aaPredicted RBP11.22□□□□□ -0.61
NUP85-224ENST00000583948 CEACAM4O75871 244 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 RASSF9O75901 435 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 ACSL3O95573 720 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 IVLP07476 585 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 FOLR1P15328 257 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 CTPS1P17812 591 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 TPSB2P20231 275 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 PTPN4P29074 926 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 MAGEA4P43358 317 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 FOXL2P58012 376 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 IL10RBQ08334 325 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 GPS2Q13227 327 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 ELOAQ14241 798 aaKnown RBP11.22□□□□□ -0.61
NUP85-224ENST00000583948 PRPSAP1Q14558 356 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 TPSAB1Q15661 275 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 CRB2Q5IJ48 1285 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 FNBP1LQ5T0N5 605 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 ZNF648Q5T619 568 aaPredicted RBP11.22□□□□□ -0.61
NUP85-224ENST00000583948 ALS2CLQ60I27 953 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 BRAT1Q6PJG6 821 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 TRMT10CQ7L0Y3 403 aaKnown RBP11.22□□□□□ -0.61
NUP85-224ENST00000583948 ANKMY2Q8IV38 441 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 PDIK1LQ8N165 341 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 SLC38A9Q8NBW4 561 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 UHMK1Q8TAS1 419 aaKnown RBP11.22□□□□□ -0.61
NUP85-224ENST00000583948 RSC1A1Q92681 617 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 SCAMP4Q969E2 229 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 ZIM3Q96PE6 472 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 PDFQ9HBH1 243 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 RBM22Q9NW64 420 aaKnown RBP eCLIP11.22□□□□□ -0.616e-11■■□□□ 13.3
NUP85-224ENST00000583948 NINJ2Q9NZG7 142 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 UBA2Q9UBT2 640 aaPredicted RBP11.22□□□□□ -0.61
NUP85-224ENST00000583948 ZNHIT2Q9UHR6 403 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 PCDHGC4Q9Y5F7 938 aa11.22□□□□□ -0.61
NUP85-224ENST00000583948 MN1Q10571 1320 aaPredicted RBP11.21□□□□□ -0.61
NUP85-224ENST00000583948 TRAFD1O14545 582 aaPredicted RBP11.21□□□□□ -0.61
NUP85-224ENST00000583948 RIPK2O43353 540 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 HLA-DQB2P05538 268 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 ACP5P13686 325 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.61
NUP85-224ENST00000583948 MAGEA6P43360 314 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 SUOXP51687 545 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 SARNPP82979 210 aaKnown RBP11.21□□□□□ -0.61
NUP85-224ENST00000583948 ITKQ08881 620 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 SPARCL1Q14515 664 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 FASTKD3Q14CZ7 662 aaKnown RBP11.21□□□□□ -0.61
NUP85-224ENST00000583948 INO80DQ53TQ3 878 aaPredicted RBP11.21□□□□□ -0.61
NUP85-224ENST00000583948 UBAP2Q5T6F2 1119 aaKnown RBP11.21□□□□□ -0.61
NUP85-224ENST00000583948 IYDQ6PHW0 289 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 CAPN12Q6ZSI9 719 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 CUZD1Q86UP6 607 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 ZBED8Q8IZ13 594 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 ZNF295-AS1Q8N0V1 137 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 IQCKQ8N0W5 287 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 OR2W6PQ8NHA6 318 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 ADAMTS17Q8TE56 1095 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 MAML1Q92585 1016 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 ECHDC3Q96DC8 303 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 DTD2Q96FN9 168 aa11.21□□□□□ -0.61
NUP85-224ENST00000583948 TEKT5Q96M29 485 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms