RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 FBXL17Q9UF56 701 aa3.54□□□□□ -1.84
COPS3-217ENST00000583160 AGRNO00468 2067 aa3.54□□□□□ -1.84
COPS3-217ENST00000583160 RIMBP3CA6NJZ7 1639 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 RIMBP3BA6NNM3 1639 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 RIMBP3Q9UFD9 1639 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 PRSS51A0A1B0GVH4 220 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 A0A1W2PRB8 838 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 ATP6V0E1O15342 81 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 PON1P27169 355 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 SNRPEP62304 92 aaKnown RBP3.53□□□□□ -1.84
COPS3-217ENST00000583160 CDR2Q01850 454 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 GPR17Q13304 367 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 CRYMQ14894 314 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 TEAD2Q15562 447 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 JAKMIP3Q5VZ66 844 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 HAUS3Q68CZ6 603 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 ZNF613Q6PF04 617 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 ANKRD52Q8NB46 1076 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 FGFBP3Q8TAT2 258 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 FAM222BQ8WU58 562 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 MAGED4Q96JG8 741 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 C18orf12Q96KH6 178 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 SYT15Q9BQS2 421 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 ABHD6Q9BV23 337 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 ITPAQ9BY32 194 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 FLRT3Q9NZU0 649 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 AASSQ9UDR5 926 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 AMACRQ9UHK6 382 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 EIF4G3O43432 1585 aaKnown RBP3.53□□□□□ -1.84
COPS3-217ENST00000583160 ARHGEF11O15085 1522 aa3.53□□□□□ -1.84
COPS3-217ENST00000583160 ZNF608Q9ULD9 1512 aaPredicted RBP3.53□□□□□ -1.84
COPS3-217ENST00000583160 SOS1Q07889 1333 aaPredicted RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 IGLV7-46A0A075B6I9 117 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 E9PI62 339 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 J3KRW8 73 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 CDC123O75794 336 aaPredicted RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 RSL1D1O76021 490 aaKnown RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 MOCS3O95396 460 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 PIGNO95427 931 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 GABRB1P18505 474 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 HOXC13P31276 330 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 NOVP48745 357 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 CDH8P55286 799 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 SNX16P57768 344 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 MPP1Q00013 466 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 HNRNPDQ14103 355 aaKnown RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 DLG2Q15700 870 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 SNX30Q5VWJ9 437 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 TMEM154Q6P9G4 183 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 TRIM65Q6PJ69 517 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 CHST9Q7L1S5 443 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 WDTC1Q8N5D0 677 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 CPSF7Q8N684 471 aaKnown RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 KBTBD8Q8NFY9 601 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 OR2T11Q8NH01 316 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 HPSE2Q8WWQ2 592 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 MTERF3Q96E29 417 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 PGAM5Q96HS1 289 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 SRSF8Q9BRL6 282 aaKnown RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 P2RY12Q9H244 342 aa3.52□□□□□ -1.85
COPS3-217ENST00000583160 OLA1Q9NTK5 396 aaKnown RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 POLA1P09884 1462 aaPredicted RBP3.52□□□□□ -1.85
COPS3-217ENST00000583160 TO15178 435 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 PRKRAO75569 313 aaKnown RBP3.51□□□□□ -1.85
COPS3-217ENST00000583160 CLTBP09497 229 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 MAN1A1P33908 653 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 MAMLD1Q13495 774 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 KRT32Q14532 448 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 CTU2Q2VPK5 515 aaKnown RBP3.51□□□□□ -1.85
COPS3-217ENST00000583160 PSRC1Q6PGN9 363 aaPredicted RBP3.51□□□□□ -1.85
COPS3-217ENST00000583160 EXOC8Q8IYI6 725 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 SPAG16Q8N0X2 631 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 SCFD2Q8WU76 684 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 SUSD6Q92537 303 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 USP6NLQ92738 828 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 AGAP3Q96P47 875 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 FGFBP2Q9BYJ0 223 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 LAT2Q9GZY6 243 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 RPS10P5Q9NQ39 176 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 RNF186Q9NXI6 227 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 RIPK3Q9Y572 518 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 LYVE1Q9Y5Y7 322 aa3.51□□□□□ -1.85
COPS3-217ENST00000583160 CHD1O14646 1710 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 CLASP1Q7Z460 1538 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 MAGI1Q96QZ7 1491 aaPredicted RBP3.5□□□□□ -1.85
COPS3-217ENST00000583160 A0A1W2PR77 199 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 CD4P01730 458 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 RB1P06400 928 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 EFNA1P20827 205 aaPredicted RBP3.5□□□□□ -1.85
COPS3-217ENST00000583160 MAGEA11P43364 429 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 SETQ01105 290 aaPredicted RBP3.5□□□□□ -1.85
COPS3-217ENST00000583160 PNRC1Q12796 327 aaPredicted RBP3.5□□□□□ -1.85
COPS3-217ENST00000583160 KCNC3Q14003 757 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 KRT33BQ14525 404 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 MELKQ14680 651 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 GORABQ5T7V8 394 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 SPINK14Q6IE38 97 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 LINGO4Q6UY18 593 aa3.5□□□□□ -1.85
COPS3-217ENST00000583160 INTS8Q75QN2 995 aaKnown RBP3.5□□□□□ -1.85
COPS3-217ENST00000583160 PIGZQ86VD9 579 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms