RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	FOXB2	Q5VYV0	432 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	C12orf40	Q86WS4	652 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	ITFG1	Q8TB96	612 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	CD244	Q9BZW8	370 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	ZDHHC4	Q9NPG8	344 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	OPTC	Q9UBM4	332 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	AURKC	Q9UQB9	309 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	ITM2B	Q9Y287	266 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085		V9GYQ6	96 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	TMEM202	A6NGA9	273 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	GRXCR1	A8MXD5	290 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	C8B	P07358	591 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	RPL38	P63173	70 aa	Known RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	ZNF77	Q15935	545 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	CRY1	Q16526	586 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	HMBOX1	Q6NT76	420 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	HACD2	Q6Y1H2	254 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	SPATA19	Q7Z5L4	167 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	CBARP	Q8N350	705 aa	Predicted RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	VCX3B	Q9H321	246 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	MRGBP	Q9NV56	204 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	UBAP1	Q9NZ09	502 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	ERVW-1	Q9UQF0	538 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	IRAK3	Q9Y616	596 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	BBIP1	A8MTZ0	92 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	VPS4B	O75351	444 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	OXTR	P30559	389 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	VIPR2	P41587	438 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	SFTPA1	Q8IWL2	248 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	GPR65	Q8IYL9	337 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	CLHC1	Q8NHS4	586 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	ISG20	Q96AZ6	181 aa	Known RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	PPWD1	Q96BP3	646 aa	Known RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	RAD9A	Q99638	391 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	BRINP2	Q9C0B6	783 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	ARL15	Q9NXU5	204 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	CNOT6	Q9ULM6	557 aa	Known RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	PDE10A	Q9Y233	779 aa		11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	TNPO3	Q9Y5L0	923 aa	Known RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	TCF20	Q9UGU0	1960 aa	Known RBP	11.91	□□□□□ -0.5
STRADA-222	ENST00000583085	TCRBV3S1	A0A5B6	114 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	OTC	P00480	354 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	SLC2A4	P14672	509 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	RPIA	P49247	311 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	RALGPS2	Q86X27	583 aa	Predicted RBP	11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	RNF175	Q8N4F7	328 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	RSPRY1	Q96DX4	576 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	MRGPRX3	Q96LB0	322 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	CNBD2	Q96M20	576 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	PPM1M	Q96MI6	270 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	CIB1	Q99828	191 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	CPEB1	Q9BZB8	566 aa	Known RBP	11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	PCDH12	Q9NPG4	1184 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	RIC8B	Q9NVN3	520 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	ABCD2	Q9UBJ2	740 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	SUN2	Q9UH99	717 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	BCAP29	Q9UHQ4	241 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	MT-ND1	P03886	318 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	CKMT2	P17540	419 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	EPOR	P19235	508 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	POLR2E	P19388	210 aa	Known RBP	11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	NEK2	P51955	445 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	EPHA5	P54756	1037 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	SELPLG	Q14242	412 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	PDK3	Q15120	406 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	CYP20A1	Q6UW02	462 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	TICAM1	Q8IUC6	712 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	MINDY1	Q8N5J2	469 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	FRS2	Q8WU20	508 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	TMEM125	Q96AQ2	219 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	EME1	Q96AY2	570 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	SLC29A1	Q99808	456 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	CERS4	Q9HA82	394 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	PPIL1	Q9Y3C6	166 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	PCDHA9	Q9Y5H5	950 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	ATG2B	Q96BY7	2078 aa		11.9	□□□□□ -0.5
STRADA-222	ENST00000583085	RECQL	P46063	649 aa	Predicted RBP	11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	FPGS	Q05932	587 aa		11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	ARHGAP15	Q53QZ3	475 aa		11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	METTL3	Q86U44	580 aa	Known RBP	11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	SLC22A15	Q8IZD6	547 aa		11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	ARMC5	Q96C12	935 aa		11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	NR1H4	Q96RI1	486 aa	Predicted RBP	11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	COQ10B	Q9H8M1	238 aa		11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	DNAAF2	Q9NVR5	837 aa	Known RBP	11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	CCL27	Q9Y4X3	112 aa		11.9	□□□□□ -0.51
STRADA-222	ENST00000583085	LINC01553	A4QN01	128 aa		11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	PLK4	O00444	970 aa		11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	PEX1	O43933	1283 aa		11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	GRIN2C	Q14957	1233 aa		11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	PRSS36	Q5K4E3	855 aa		11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	ELMSAN1	Q6PJG2	1045 aa		11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	UBE2R2	Q712K3	238 aa	Predicted RBP	11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	KRTCAP2	Q8N6L1	136 aa		11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	HOPX	Q9BPY8	73 aa	Predicted RBP	11.89	□□□□□ -0.51
STRADA-222	ENST00000583085	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms