RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	FERMT1	Q9BQL6	677 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CCM2	Q9BSQ5	444 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	COG4	Q9H9E3	785 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	BTRC	Q9Y297	605 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PCDHA3	Q9Y5H8	950 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	HEBP2	Q9Y5Z4	205 aa		11.3	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CLEC18A	A5D8T8	446 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114		A6NL46	340 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	IFRD1	O00458	451 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZNF185	O15231	689 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LDB2	O43679	373 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RECK	O95980	971 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	GNLY	P22749	145 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PRDX3	P30048	256 aa	Known RBP	11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CYLC1	P35663	651 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	COPS2	P61201	443 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RAPSN	Q13702	412 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	BRD3	Q15059	726 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	IZUMO3	Q5VZ72	239 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	HIST2H2BC	Q6DN03	193 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CLEC18B	Q6UXF7	455 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	NAPRT	Q6XQN6	538 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TRIM73	Q86UV7	250 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SERPINA9	Q86WD7	417 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SYTL1	Q8IYJ3	562 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CCDC170	Q8IYT3	715 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	DSEL	Q8IZU8	1212 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CLDN19	Q8N6F1	224 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	EFCAB3	Q8N7B9	438 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CLEC18C	Q8NCF0	446 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	OR52E1	Q8NGJ3	308 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	OR8K5	Q8NH50	307 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CPT1C	Q8TCG5	803 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CPT1B	Q92523	772 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ALG3	Q92685	438 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	MFRP	Q9BY79	579 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SLC7A5P2	Q9GIP4	190 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	OR52A5	Q9H2C5	316 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	C1GALT1	Q9NS00	363 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZDHHC3	Q9NYG2	299 aa		11.29	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	MED13	Q9UHV7	2174 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	KLHL33	A6NCF5	533 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	OR51F1	A6NGY5	319 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	AGAP14	A8MT82	685 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	VPS4B	O75351	444 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PYGM	P11217	842 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	GP1BB	P13224	206 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ACRV1	P26436	265 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RORA	P35398	523 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	HADHA	P40939	763 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	CD97	P48960	835 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ITGA1	P56199	1179 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	RWDD2B	P57060	319 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	GSDMD	P57764	484 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	POU6F1	Q14863	301 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	DEFB110	Q30KQ9	67 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PRR30	Q53SZ7	412 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZNF789	Q5FWF6	425 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	FAM198B	Q6UWH4	519 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ARHGEF18	Q6ZSZ5	1173 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	AMIGO1	Q86WK6	493 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PIANP	Q8IYJ0	282 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	FAM71D	Q8N9W8	422 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	SEC14L1	Q92503	715 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LUC7L	Q9NQ29	371 aa	Known RBP	11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	LATS2	Q9NRM7	1088 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PCMTD2	Q9NV79	361 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	ACTR10	Q9NZ32	417 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	MAP10	Q9P2G4	905 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	TCFL5	Q9UL49	500 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	VPS4A	Q9UN37	437 aa		11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK5RAP3-223	ENST00000582114	C17orf113	A0A1B0GUU1	675 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	C2orf74	A8MZ97	194 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ZNF749	O43361	778 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TMEM63A	O94886	807 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TJP3	O95049	919 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	METTL18	O95568	372 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PTMA	P06454	111 aa	Known RBP	11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	PTPN7	P35236	360 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ATP1A4	Q13733	1029 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	DBN1	Q16643	649 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ZNF658B	Q4V348	819 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	C1orf189	Q5VU69	101 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ZNF449	Q6P9G9	518 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	SARM1	Q6SZW1	724 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CDHR3	Q6ZTQ4	885 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ADGRF3	Q8IZF5	1079 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	CARF	Q8N187	725 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ACRBP	Q8NEB7	543 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	FDCSP	Q8NFU4	85 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	OR5AR1	Q8NGP9	310 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	ADAMTS17	Q8TE56	1095 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	HEXDC	Q8WVB3	486 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TFG	Q92734	400 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	N4BP2L2	Q92802	583 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	LRFN5	Q96NI6	719 aa		11.27	□□□□□ -0.61
CDK5RAP3-223	ENST00000582114	TRAPPC9	Q96Q05	1148 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms