RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ACP1P24666 158 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 CRABP2P29373 138 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 SLC26A3P40879 764 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 MAGEA12P43365 314 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 MROH9Q5TGP6 573 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 FAM45BPQ6NSW5 357 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 CNSTQ6PJW8 725 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 OTOAQ7RTW8 1153 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 SLC9B2Q86UD5 537 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 EXOC3L1Q86VI1 746 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 CYP4X1Q8N118 509 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 KRT222Q8N1A0 295 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 FAM45AQ8TCE6 357 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 LKAAEAR1Q8TD35 194 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 SLC37A2Q8TED4 501 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 KCNJ9Q92806 393 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 TMEM159Q96B96 161 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 MRRFQ96E11 262 aaKnown RBP15.18■□□□□ 0.02
SS18-216ENST00000580751 OGFRQ9NZT2 677 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 SLC17A6Q9P2U8 582 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 U3KQA8 63 aa15.18■□□□□ 0.02
SS18-216ENST00000580751 CPED1A4D0V7 1026 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 IQCF5A8MTL0 148 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 IFRD1O00458 451 aaPredicted RBP15.17■□□□□ 0.02
SS18-216ENST00000580751 NIPSNAP2O75323 286 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 PIAS1O75925 651 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 GP1BAP07359 652 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 F7P08709 466 aaPredicted RBP15.17■□□□□ 0.02
SS18-216ENST00000580751 COL6A2P12110 1019 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 BRAFP15056 766 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 GLB1P16278 677 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 CCR7P32248 378 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 FASLGP48023 281 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 ACADVLP49748 655 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 MAZP56270 477 aaKnown RBP15.17■□□□□ 0.02
SS18-216ENST00000580751 MAGOHP61326 146 aaKnown RBP15.17■□□□□ 0.02
SS18-216ENST00000580751 SLC18A2Q05940 514 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 ILKQ13418 452 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 XKR5Q6UX68 686 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 SFTPA2Q8IWL1 248 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 TRIM48Q8IWZ4 208 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 ARL14Q8N4G2 192 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 LILRA3Q8N6C8 439 aaPredicted RBP15.17■□□□□ 0.02
SS18-216ENST00000580751 PATE1Q8WXA2 126 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 WWP1Q9H0M0 922 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 CNOT10Q9H9A5 744 aaKnown RBP15.17■□□□□ 0.02
SS18-216ENST00000580751 SARS2Q9NP81 518 aaKnown RBP15.17■□□□□ 0.02
SS18-216ENST00000580751 POT1Q9NUX5 634 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 KLHL42Q9P2K6 505 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 PSMD13Q9UNM6 376 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 WDR37Q9Y2I8 494 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 VWA7Q9Y334 891 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 PCDHGA1Q9Y5H4 931 aa15.17■□□□□ 0.02
SS18-216ENST00000580751 FAM95CA0A1B0GW59 222 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 SLC5A10A0PJK1 596 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 DCDC2BA2VCK2 349 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 RHPN2P1A8MT19 583 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 H3BQF6 201 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 PRPF4O43172 522 aaKnown RBP eCLIP15.16■□□□□ 0.02
SS18-216ENST00000580751 ZW10O43264 779 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 VPS26AO75436 327 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 RFPL1O75677 317 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 RFPL3O75679 317 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 GSTA1P08263 222 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 CDK4P11802 303 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 MYF5P13349 255 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 XRCC1P18887 633 aaPredicted RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 AOAHP28039 575 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 CCNFP41002 786 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 SKIV2L2P42285 1042 aaKnown RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 PREPP48147 710 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 CSRP3P50461 194 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 SLC12A2P55011 1212 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 SIM1P81133 766 aaPredicted RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 HHEXQ03014 270 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 HSPA14Q0VDF9 509 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 ZKSCAN8Q15776 578 aaPredicted RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 TTLL9Q3SXZ7 439 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 PLEKHS1Q5SXH7 462 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 GUSBP11Q6P575 273 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 ZNF549Q6P9A3 640 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 SH2D5Q6ZV89 423 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 EFL1Q7Z2Z2 1120 aaKnown RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 PDZD3Q86UT5 571 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 RBM12BQ8IXT5 1001 aaKnown RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 IFI44Q8TCB0 444 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 SH3KBP1Q96B97 665 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 CXorf40BQ96DE9 158 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 RMDN2Q96LZ7 410 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 AARSD1Q9BTE6 412 aaKnown RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 OR52A5Q9H2C5 316 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 SCHIP1Q9P0W5 487 aaPredicted RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 LRIT1Q9P2V4 623 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 CPNE7Q9UBL6 633 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 APOBEC2Q9Y235 224 aaKnown RBP15.16■□□□□ 0.02
SS18-216ENST00000580751 SPTBN2O15020 2390 aa15.16■□□□□ 0.02
SS18-216ENST00000580751 TRBV23OR9-2A0A075B6M9 112 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 SPAARA0A1B0GVQ0 90 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 CCDC189A1A4V9 331 aa15.15■□□□□ 0.02
SS18-216ENST00000580751 OR52A4PA6NMU1 304 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms