RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 RPS15P62841 145 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 CDH17Q12864 832 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 GSE1Q14687 1217 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 OASLQ15646 514 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 UGT8Q16880 541 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 DEFB109BQ30KR1 87 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 LACTB2Q53H82 288 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 C4orf22Q6V702 233 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 ZNF662Q6ZS27 426 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 HPS6Q86YV9 775 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 LCN9Q8WX39 176 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 CPT1BQ92523 772 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 ABHD17AQ96GS6 310 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 SRMSQ9H3Y6 488 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 POLG2Q9UHN1 485 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 ZKSCAN5Q9Y2L8 839 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 PCDHGB7Q9Y5F8 929 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 PCDHGA9Q9Y5G4 932 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 SPTBN1Q01082 2364 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 SNRNP200O75643 2136 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 USP9YO00507 2555 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 USP9XQ93008 2570 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 HEATR9A2RTY3 570 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 AP3B1O00203 1094 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 KDM1AO60341 852 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 RFPL1O75677 317 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 TIAF1O95411 115 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 GAS8O95995 478 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 KLK3P07288 261 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 HBQ1P09105 142 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 EBLN1P0CF75 366 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 PRKAR1AP10644 381 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 ACADLP28330 430 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 PRDX3P30048 256 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 PPARGP37231 505 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 OLIG2Q13516 323 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 KRT33BQ14525 404 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 PAPD7Q5XG87 772 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 AADACL2Q6P093 401 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 DRICH1Q6PGQ1 229 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 CT55Q8WUE5 264 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 TFGQ92734 400 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 ALS2CR12Q96Q35 445 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 C17orf62Q9BQA9 187 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 TMEM121Q9BTD3 319 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 MLXIPLQ9NP71 852 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 ENAMQ9NRM1 1142 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 OR6C2Q9NZP2 312 aa14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 CFAP20Q9Y6A4 193 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 SPTAN1Q13813 2472 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-216ENST00000580419 FER1L5A0AVI2 2057 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 C2orf74A8MZ97 194 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 LIASO43766 372 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 KRT86O43790 486 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 SCRG1O75711 98 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 POLBP06746 335 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 CD63P08962 238 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 SHMT2P34897 504 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 RORAP35398 523 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 GDF10P55107 478 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 TLE1Q04724 770 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 KLRB1Q12918 225 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 SEMA5AQ13591 1074 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 DBN1Q16643 649 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 ZRANB3Q5FWF4 1079 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 ZNF789Q5FWF6 425 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 AMIGO1Q86WK6 493 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 PIANPQ8IYJ0 282 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 TBC1D21Q8IYX1 336 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 OR4E2Q8NGC2 313 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 FAM118BQ9BPY3 351 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 DHRS4Q9BTZ2 278 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 NLNQ9BYT8 704 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 SERTAD3Q9UJW9 196 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 FARSAQ9Y285 508 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 R3HDM2Q9Y2K5 976 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 AP1M2Q9Y6Q5 423 aa14.07□□□□□ -0.16
SMARCE1-216ENST00000580419 SLC5A10A0PJK1 596 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 PIPSLA2A3N6 862 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 GOLGA6L6A8MZA4 724 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 MEN1O00255 615 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 OR56A5P0C7T3 313 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 CDH3P22223 829 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 ADRA1DP25100 572 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 MSNP26038 577 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 FOXN2P32314 431 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 CD97P48960 835 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 FOXK1P85037 733 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 ERV3-1Q14264 604 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 SPARCL1Q14515 664 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 KCNAB1Q14722 419 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 POU6F1Q14863 301 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 PLEKHS1Q5SXH7 462 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 C16orf46Q6P387 395 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 AFTPHQ6ULP2 937 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 TMEM126BQ8IUX1 230 aa14.06□□□□□ -0.16
SMARCE1-216ENST00000580419 ADGRF3Q8IZF5 1079 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms