RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 AQP4P55087 323 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 BTKQ06187 659 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DYNC1I2Q13409 638 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 STARD3Q14849 445 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZNF284Q2VY69 593 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ARHGAP22Q7Z5H3 698 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CEP70Q8NHQ1 597 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KCNJ9Q92806 393 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RCN3Q96D15 328 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LINGO1Q96FE5 620 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ECSITQ9BQ95 431 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RTKNQ9BST9 563 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 HDAC8Q9BY41 377 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ANGPTL2Q9UKU9 493 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TMEM202A6NGA9 273 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SUPT3HB4E1H0 165 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SDHDO14521 159 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PFDN6O15212 129 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SUPT3HO75486 399 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DPP6P42658 865 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CTSCP53634 463 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ELP6Q0PNE2 266 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CNPY1Q3B7I2 92 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 HABP4Q5JVS0 413 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RAET1GQ6H3X3 334 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PGM2L1Q6PCE3 622 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LILRA3Q8N6C8 439 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ACTRT2Q8TDY3 377 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CXorf40AQ8TE69 158 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DNASE1L2Q92874 299 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ESAMQ96AP7 390 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FBXO9Q9UK97 447 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CNOT6Q9ULM6 557 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 COPG1Q9Y678 874 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DOCK9Q9BZ29 2069 aa12.45□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KRT87PA6NCN2 255 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NPEPPSL1A6NEC2 478 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 BTN3A1O00481 513 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GPC4O75487 556 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 IMPDH1P20839 514 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 C5AR1P21730 350 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PRDX6P30041 224 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CCR7P32248 378 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NSG1P42857 185 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 THOP1P52888 689 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ART3Q13508 389 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FGL2Q14314 439 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TRIP10Q15642 601 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PPP1R3AQ16821 1122 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZNF776Q68DI1 518 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RAB44Q7Z6P3 723 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DHDDSQ86SQ9 333 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 BTN2A2Q8WVV5 523 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NUS1Q96E22 293 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MRGPRX1Q96LB2 322 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CDRT15Q96T59 188 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NPAS2Q99743 824 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CCDC28BQ9BUN5 200 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FOXQ1Q9C009 403 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 FZD3Q9NPG1 666 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 MBNL1Q9NR56 388 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 IRAK4Q9NWZ3 460 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RNF112Q9ULX5 631 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PCDHGB4Q9UN71 923 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZFR2Q9UPR6 939 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PRKAB1Q9Y478 270 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PCDHGB5Q9Y5G0 923 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KRBA1A5PL33 1030 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SGTAO43765 313 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 XRCC1P18887 633 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ADARP55265 1226 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 HSPA14Q0VDF9 509 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TBC1D25Q3MII6 688 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ZNF678Q5SXM1 525 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KIAA1324Q6UXG2 1013 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 RASGEF1AQ8N9B8 481 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 KYQ8NBH2 561 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GLYATL1Q969I3 302 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SIPA1Q96FS4 1042 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SLC45A3Q96JT2 553 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LGR4Q9BXB1 951 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GSTO2Q9H4Y5 243 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 GNPTGQ9UJJ9 305 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TMEM98Q9Y2Y6 226 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DHRS7Q9Y394 339 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 TRAF6Q9Y4K3 522 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PCYT1BQ9Y5K3 369 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SCN8AQ9UQD0 1980 aa12.44□□□□□ -0.42
CDK5RAP3-217ENST00000580287 LOC730098B7Z3J9 87 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PPP6CO00743 305 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 UBFD1O14562 309 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 CCNT2O60583 730 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 DNTTP04053 509 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PCCBP05166 539 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 PYGLP06737 847 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 ATP1B2P14415 290 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NDUFV2P19404 249 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 NFKBIAP25963 317 aa12.43□□□□□ -0.42
CDK5RAP3-217ENST00000580287 SLC26A3P40879 764 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms