RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PHACTR4Q8IZ21 702 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 NDUFAF2Q8N183 169 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 NXPE1Q8N323 547 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 MINDY1Q8N5J2 469 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 ZNF548Q8NEK5 533 aaPredicted RBP3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 OR56A4Q8NGH8 313 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 GPR150Q8NGU9 434 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 CCL4L1Q8NHW4 92 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 CEP76Q8TAP6 659 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 CCHCR1Q8TD31 782 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 GPBAR1Q8TDU6 330 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 SNX19Q92543 992 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 LPGAT1Q92604 370 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 HDAC10Q969S8 669 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 TSACCQ96A04 125 aaPredicted RBP3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 LRRC45Q96CN5 670 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 LRRC39Q96DD0 335 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 HIC2Q96JB3 615 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 LINC00615Q96LM1 132 aaPredicted RBP3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 WDR92Q96MX6 357 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 BIRC8Q96P09 236 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 ELF4Q99607 663 aaPredicted RBP3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 FERMT1Q9BQL6 677 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 EDEM2Q9BV94 578 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 BOCQ9BWV1 1114 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 TRIM31Q9BZY9 425 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 ZDHHC5Q9C0B5 715 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 MIR1-1HGQ9H1L0 117 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 TRIM39Q9HCM9 518 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 ARFGAP3Q9NP61 516 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 AASDHPPTQ9NRN7 309 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 TM7SF3Q9NS93 570 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 KCTD5Q9NXV2 234 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 GOLGA6AQ9NYA3 693 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 IL1RAPL1Q9NZN1 696 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 SUFUQ9UMX1 484 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 CDYLQ9Y232 598 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 PLEKHM1Q9Y4G2 1056 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 PCDHGB2Q9Y5G2 931 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 PSAT1Q9Y617 370 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 PRSS21Q9Y6M0 314 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM169AQ9Y6X4 670 aa3.73□□□□□ -1.81
SMARCE1-215ENST00000578995 SCN2AQ99250 2005 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SDR42E2A6NKP2 422 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM159BA6NKW6 160 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 C2orf81A6NN90 581 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CXorf49A8MYA2 514 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GPR89AB7ZAQ6 455 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GOLGA8KD6RF30 607 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 E7EVH7 732 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GOLGA8TH3BQL2 631 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 AP3B1O00203 1094 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TRIM38O00635 465 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SLC30A4O14863 429 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SCAMP1O15126 338 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 EIF3HO15372 352 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 STX7O15400 261 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 VEGFDO43915 354 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 OR1I1O60431 355 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 VAPBO95292 243 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CFIP05156 583 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PYGLP06737 847 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GSTP1P09211 210 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM153BP0C7A2 387 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GPR89BP0CG08 455 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TPBGLP0DKB5 382 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GNSP15586 552 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PGAM1P18669 254 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 OGNP20774 298 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 RPS3P23396 243 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 NFKBIAP25963 317 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GCAP28676 217 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SSTR1P30872 391 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ACTN2P35609 894 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 HADHAP40939 763 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SLC1A2P43004 574 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 GPR1P46091 355 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PRLHRP49683 370 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ADARP55265 1226 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SRP54P61011 504 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TMPRSS15P98073 1019 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PDE1BQ01064 536 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 IL9RQ01113 521 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CACNG1Q06432 222 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TMEM115Q12893 351 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 PDIA2Q13087 525 aaKnown RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ITGA9Q13797 1035 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SEPT6Q14141 434 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ITIH4Q14624 930 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 STAT4Q14765 748 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 NR1D2Q14995 579 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 UAP1Q16222 522 aaPredicted RBP3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 FAM153CQ494X1 144 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SPANXN3Q5MJ09 141 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 SFRP5Q5T4F7 317 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 TEDDM1Q5T9Z0 273 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 STPG1Q5TH74 334 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 ZDHHC20Q5W0Z9 365 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 AFTPHQ6ULP2 937 aa3.72□□□□□ -1.81
SMARCE1-215ENST00000578995 CYS1Q717R9 158 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms