RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 NIPSNAP2O75323 286 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 NFATC1O95644 943 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 IMPDH1P20839 514 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 RECQLP46063 649 aaPredicted RBP13.57□□□□□ -0.24
RNF43-202ENST00000577625 DMPKQ09013 629 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 NFATC2Q13469 925 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 TRIM16LQ309B1 348 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 SLC9B1Q4ZJI4 515 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 TMEM184AQ6ZMB5 413 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 CYP2U1Q7Z449 544 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 SNX20Q7Z614 316 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 NKAPQ8N5F7 415 aaKnown RBP13.57□□□□□ -0.24
RNF43-202ENST00000577625 KDM1BQ8NB78 822 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 DLG3Q92796 817 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 KIAA1191Q96A73 305 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 PHF21BQ96EK2 531 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 SLC30A3Q99726 388 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 FAM83CQ9BQN1 747 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 MTG2Q9H4K7 406 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 OBP2AQ9NY56 170 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 PRPF19Q9UMS4 504 aaKnown RBP13.57□□□□□ -0.24
RNF43-202ENST00000577625 PCDHB1Q9Y5F3 818 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 DENND4AQ7Z401 1863 aa13.57□□□□□ -0.24
RNF43-202ENST00000577625 A0A087WXM4 84 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 TNFRSF10AO00220 468 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 PRMT5O14744 637 aaPredicted RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 ATE1O95260 518 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 SRPRAP08240 638 aaKnown RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 ITGALP20701 1170 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 TTKP33981 857 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 SPAM1P38567 509 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 NNMTP40261 264 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 BMXP51813 675 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 HNRNPFP52597 415 aaKnown RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 PTPN5P54829 565 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 MRPS22P82650 360 aaKnown RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 OR4D1Q15615 310 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 KRT80Q6KB66 452 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 XKR5Q6UX68 686 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 FRMD7Q6ZUT3 714 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 LILRA2Q8N149 483 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 GPR26Q8NDV2 337 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 ADAMTS16Q8TE57 1224 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 NXPE3Q969Y0 559 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 ZNF597Q96LX8 424 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 SH3GL1Q99961 368 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 TRMOQ9BU70 441 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 RPF2Q9H7B2 306 aaKnown RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 BRD9Q9H8M2 597 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 OLAHQ9NV23 265 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 TRMT6Q9UJA5 497 aaKnown RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 SZT2Q5T011 3432 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 LRRK1Q38SD2 2015 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 GLYATL1P3A0A0U1RQE8 302 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 PRSS51A0A1B0GVH4 220 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 GIPC1O14908 333 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 KERAO60938 352 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 CTSLP07711 333 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 MTHFD2P13995 350 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 ZNF26P17031 533 aaPredicted RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
RNF43-202ENST00000577625 SLC6A11P48066 632 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 CTBSQ01459 385 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 PTSQ03393 145 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 ZNF678Q5SXM1 525 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 ANKRD54Q6NXT1 300 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 STAG3L4Q8TBR4 150 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 CD200R1Q8TD46 325 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 PKP2Q99959 881 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 RTKNQ9BST9 563 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 SHCBP1LQ9BZQ2 653 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 GSTO2Q9H4Y5 243 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 ASB8Q9H765 288 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 EML4Q9HC35 981 aaKnown RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 TCF7L2Q9NQB0 619 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 HPS4Q9NQG7 708 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 B4GALT6Q9UBX8 382 aa13.56□□□□□ -0.24
RNF43-202ENST00000577625 RBMX2Q9Y388 322 aaKnown RBP13.56□□□□□ -0.24
RNF43-202ENST00000577625 TSPAN11A1L157 253 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 ANKRD34BA5PLL1 514 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 PRRT4C9JH25 899 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 H3BMQ9 156 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 LEFTY1O75610 366 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 C1SP09871 688 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 HNRNPLP14866 589 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNF43-202ENST00000577625 HERVK_113P63132 956 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 FLOT2Q14254 428 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 CHRNA6Q15825 494 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 GPR33Q49SQ1 333 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 UGT3A1Q6NUS8 523 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 BRAT1Q6PJG6 821 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 VITQ6UXI7 678 aa13.55□□□□□ -0.24
RNF43-202ENST00000577625 VASH1Q7L8A9 365 aaPredicted RBP13.55□□□□□ -0.24
RNF43-202ENST00000577625 ZNF366Q8N895 744 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms