RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ATXN10Q9UBB4 475 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 SLC23A2Q9UGH3 650 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 SHOC2Q9UQ13 582 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 LUC7L2Q9Y383 392 aaKnown RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 HYOU1Q9Y4L1 999 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 HEY1Q9Y5J3 304 aa6.14□□□□□ -1.43
NUP88-212ENST00000576708 HELZ2Q9BYK8 2649 aaKnown RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 ARHGEF17Q96PE2 2063 aaPredicted RBP6.14□□□□□ -1.43
NUP88-212ENST00000576708 SDK2Q58EX2 2172 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TRBV23-1A0A0A0MS06 115 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 LOC101059948A0A1B0GTJ6 334 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 LRRD1A4D1F6 860 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 C7orf72A4D263 438 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 A6NCN8 305 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 C3orf70A6NLC5 250 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 ANKRD66B4E2M5 251 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 F5H423 210 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 GOLGA6L19H0YKK7 550 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 STMND1H3BQB6 276 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 NKX2-8O15522 239 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 GRID2O43424 1007 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 DUX1O43812 170 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 RAD1O60671 282 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 MTX2O75431 263 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 H2AFZP0C0S5 128 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TNNT1P13805 278 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 ZNF30P17039 623 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 ZNF8P17098 575 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 TYRP1P17643 537 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TACR1P25103 407 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 CD82P27701 267 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 FASLGP48023 281 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 GFERP55789 205 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 DYNLT1P63172 113 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TPM4P67936 248 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 HHEXQ03014 270 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 AP1B1Q10567 949 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TRA2AQ13595 282 aaKnown RBP eCLIP6.13□□□□□ -1.43
NUP88-212ENST00000576708 PDK2Q15119 407 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 NOMO1Q15155 1222 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 KCNMB1Q16558 191 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 CLPPQ16740 277 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 ASTE1Q2TB18 679 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 KHDC1Q4VXA5 237 aaKnown RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 COLEC12Q5KU26 742 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 HENMT1Q5T8I9 393 aaKnown RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 ATP1A1-AS1Q5TC04 95 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 GALNT18Q6P9A2 607 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 IYDQ6PHW0 289 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 H2AFVQ71UI9 128 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 ADGRG6Q86SQ4 1221 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 PTRH1Q86Y79 214 aaKnown RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 LRRC49Q8IUZ0 686 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 CACNA2D3Q8IZS8 1091 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 LILRA2Q8N149 483 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 PLD5Q8N7P1 536 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 OR10G6Q8NH81 332 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 SPATA22Q8NHS9 363 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 THAP3Q8WTV1 239 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 CTNNBL1Q8WYA6 563 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 FAM168AQ92567 244 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 DIO2Q92813 273 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 FATE1Q969F0 183 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 HDAC11Q96DB2 347 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 AGAP3Q96P47 875 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 PLEKHG4BQ96PX9 1271 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TRIB3Q96RU7 358 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 LYSMD1Q96S90 227 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 CHP1Q99653 195 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 MLPHQ9BV36 600 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 SPATA16Q9BXB7 569 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 OR2AG1Q9H205 316 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 CLMPQ9H6B4 373 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 BPIFA1Q9NP55 256 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 KLC4Q9NSK0 619 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 STARD5Q9NSY2 213 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 SPTLC3Q9NUV7 552 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 PKD2L2Q9NZM6 624 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 PDP2Q9P2J9 529 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TRIM10Q9UDY6 481 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 TMPRSS11EQ9UL52 423 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 DNAJC16Q9Y2G8 782 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 PCDHGA3Q9Y5H0 932 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 SPO11Q9Y5K1 396 aa6.13□□□□□ -1.43
NUP88-212ENST00000576708 HEMK1Q9Y5R4 338 aaPredicted RBP6.13□□□□□ -1.43
NUP88-212ENST00000576708 HMGB1P1B2RPK0 211 aaPredicted RBP6.12□□□□□ -1.43
NUP88-212ENST00000576708 B4E171 279 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 ZW10O43264 779 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 SUV39H1O43463 412 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 NUAK1O60285 661 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 MT-CYBP00156 380 aaPredicted RBP6.12□□□□□ -1.43
NUP88-212ENST00000576708 KRT1P04264 644 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 PYGLP06737 847 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 KRT7P08729 469 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 PRKAR1AP10644 381 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 CA5AP35218 305 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 TSPAN7P41732 249 aa6.12□□□□□ -1.43
NUP88-212ENST00000576708 LEPRP48357 1165 aaKnown RBP6.12□□□□□ -1.43
NUP88-212ENST00000576708 RPL26P61254 145 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms