RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 GSTT2BP0CG30 244 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TNNI3P19429 210 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 GSTM2P28161 218 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 SERPINA4P29622 427 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 OPRL1P41146 370 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 SP2Q02086 613 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF45Q02386 682 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 VGLL4Q14135 290 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 USP39Q53GS9 565 aaKnown RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 LYPLAL1Q5VWZ2 237 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TAPT1Q6NXT6 567 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PLEKHG7Q6ZR37 379 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 UBE2R2Q712K3 238 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 OR13C4Q8NGS5 318 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 CSGALNACT1Q8TDX6 532 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 LGALS12Q96DT0 336 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF641Q96N77 438 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 BBS4Q96RK4 519 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 FNDC11Q9BVV2 318 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANKRA2Q9H9E1 313 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 WDR70Q9NW82 654 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PAK1IP1Q9NWT1 392 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TRPV2Q9Y5S1 764 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PGRMC2O15173 223 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANXA8P13928 327 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ATF4P18848 351 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 GGT5P36269 586 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC13A2Q13183 592 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TECRLQ5HYJ1 363 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 LCN8Q6JVE9 175 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 CERS6Q6ZMG9 384 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TP53INP1Q96A56 240 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 MYRFLQ96LU7 910 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZFP42Q96MM3 310 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 POLR2J2Q9GZM3 115 aaKnown RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 SACM1LQ9NTJ5 587 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TBC1D14Q9P2M4 693 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 CPA4Q9UI42 421 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC25A13Q9UJS0 675 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF214Q9UL59 606 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 EMCNQ9ULC0 261 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCDHGB3Q9Y5G1 929 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 C5P01031 1676 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PER2O15055 1255 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 HTR1EP28566 365 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 NUDT6P53370 316 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 GNG2P59768 71 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 HMGCS1Q01581 520 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 GRB7Q14451 532 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 HFE2Q6ZVN8 426 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 CFAP52Q8N1V2 620 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 TMEM199Q8N511 208 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 OR10Q1Q8NGQ4 319 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 CNIH3Q8TBE1 160 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 C8orf48Q96LL4 319 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 COPS8Q99627 209 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 LHPPQ9H008 270 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 MIR1-1HGQ9H1L0 117 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 NKIRAS2Q9NYR9 191 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 ARL5AQ9Y689 179 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 COL1A2P08123 1366 aa12.91□□□□□ -0.34
PCDHGB3-201ENST00000576222 RFPL2O75678 378 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 ATE1O95260 518 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 G6PDP11413 515 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PSKH1P11801 424 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 HSD17B1P14061 328 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 FPR1P21462 350 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 ITPKAP23677 461 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PRKAG1P54619 331 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 CLDN10P78369 228 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 CLEC20AQ6ZU45 233 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 USP30Q70CQ3 517 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC30A2Q9BRI3 323 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 NME4O00746 187 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 TSPAN4O14817 238 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 ESR1P03372 595 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 MYL9P24844 172 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PTX3P26022 381 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PTGS2P35354 604 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 GJA9P57773 515 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PFKPQ01813 784 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 FAM92BQ6ZTR7 304 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 TEX47Q8TBZ9 253 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 C11orf24Q96F05 449 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 KCNC2Q96PR1 638 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 NPY6RQ99463 290 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 KLHL31Q9H511 634 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 PPEF2O14830 753 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 NR2F1P10589 423 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 GTF2E2P29084 291 aaKnown RBP12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 MAP2K4P45985 399 aa12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 NKX2-5P52952 324 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB3-201ENST00000576222 CCBE1Q6UXH8 406 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms