RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GSTA2P09210 222 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 TPBGLP0DKB5 382 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 RALBP11234 206 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 MTHFD1P11586 935 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 GLB1P16278 677 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 OGNP20774 298 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 SDHBP21912 280 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 IFFO1Q0D2I5 559 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 HSPA14Q0VDF9 509 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 TARDBPQ13148 414 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 PRKG2Q13237 762 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 THOC5Q13769 683 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 ACSBG2Q5FVE4 666 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 TEDDM1Q5T9Z0 273 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 METRNLQ641Q3 311 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 PTRHD1Q6GMV3 140 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 LVRNQ6Q4G3 990 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 ZNF574Q6ZN55 896 aaPredicted RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 USP53Q70EK8 1073 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 C2CD4AQ8NCU7 369 aaPredicted RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 OR5AR1Q8NGP9 310 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 SCG3Q8WXD2 468 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 ADAMTS14Q8WXS8 1223 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 PEX13Q92968 403 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 ZBTB9Q96C00 473 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 MRRFQ96E11 262 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 SGSM3Q96HU1 749 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 LINC00615Q96LM1 132 aaPredicted RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 IL17FQ96PD4 163 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 OLFM1Q99784 485 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 C19orf43Q9BQ61 176 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 CCM2Q9BSQ5 444 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 UNKQ9C0B0 810 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 XKR8Q9H6D3 395 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 ACSS3Q9H6R3 686 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 KLHL3Q9UH77 587 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 FBXO5Q9UKT4 447 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 IKZF3Q9UKT9 509 aa7.72□□□□□ -1.17
CCDC40-215ENST00000576033 NOVA2Q9UNW9 492 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 MAP1BP46821 2468 aaKnown RBP7.72□□□□□ -1.17
CCDC40-215ENST00000576033 IGHV1OR21-1A0A087WYE8 117 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 TCRBV9S1A1TA0A576 114 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 C1QTNF9BB2RNN3 333 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 GPR89AB7ZAQ6 455 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 D6RAR5 112 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 AP3B1O00203 1094 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 NTN3O00634 580 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CDH16O75309 829 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CSO75390 466 aaKnown RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 AP2A2O94973 939 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 AHSGP02765 367 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 SLC35G4P0C7Q5 338 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 OR56A5P0C7T3 313 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 C1QTNF9P0C862 333 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 GPR89BP0CG08 455 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 PAMP19021 973 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 IDSP22304 550 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CD1CP29017 333 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 FASLGP48023 281 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 LEPRP48357 1165 aaKnown RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 TTPAP49638 278 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CLCN7P51798 805 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 MAGOHP61326 146 aaKnown RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 PPP2R2AP63151 447 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 LAMB3Q13751 1172 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 NR1D2Q14995 579 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 SYTL3Q4VX76 610 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 AARS2Q5JTZ9 985 aaKnown RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 SNAP47Q5SQN1 464 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 AGAP9Q5VTM2 703 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CDCP2Q5VXM1 449 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CAPRIN2Q6IMN6 1127 aaKnown RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 MRNIPQ6NTE8 343 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 ABRAXAS1Q6UWZ7 409 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CERS6Q6ZMG9 384 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CYS1Q717R9 158 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 PIWIL4Q7Z3Z4 852 aaKnown RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 TAX1BP1Q86VP1 789 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CNTN4Q8IWV2 1026 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 TRIM48Q8IWZ4 208 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 FAM20CQ8IXL6 584 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 C2orf73Q8N5S3 287 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 ARFGAP2Q8N6H7 521 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CFAP61Q8NHU2 1237 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 GSDMBQ8TAX9 411 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 MZB1Q8WU39 189 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CXorf40BQ96DE9 158 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 GPR21Q99679 349 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 AARSD1Q9BTE6 412 aaKnown RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 TMEM121BQ9BXQ6 578 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 ZMYND15Q9H091 742 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 STMN4Q9H169 189 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-215ENST00000576033 LRRN3Q9H3W5 708 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 CAB39LQ9H9S4 337 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 SLC40A1Q9NP59 571 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 KCNK4Q9NYG8 393 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 SLC24A2Q9UI40 661 aa7.71□□□□□ -1.18
CCDC40-215ENST00000576033 GNPTGQ9UJJ9 305 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms