RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SEMA6CQ9H3T2 930 aa14.83□□□□□ -0.04
LITAF-217ENST00000575426 KIR3DX1Q9H7L2 352 aa14.83□□□□□ -0.04
LITAF-217ENST00000575426 ZFATQ9P243 1243 aa14.83□□□□□ -0.04
LITAF-217ENST00000575426 POLG2Q9UHN1 485 aa14.83□□□□□ -0.04
LITAF-217ENST00000575426 SLC24A2Q9UI40 661 aa14.83□□□□□ -0.04
LITAF-217ENST00000575426 PCM1Q15154 2024 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 BHMG1C9JSJ3 638 aaPredicted RBP14.82□□□□□ -0.04
LITAF-217ENST00000575426 GPC4O75487 556 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 SLCO2B1O94956 709 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 GSTA2P09210 222 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 HOXB3P14651 431 aaPredicted RBP14.82□□□□□ -0.04
LITAF-217ENST00000575426 ACADLP28330 430 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 MAGEA4P43358 317 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 ABRQ12979 859 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 CAMK2BQ13554 666 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 TTLL9Q3SXZ7 439 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 SNAP47Q5SQN1 464 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 UGT3A1Q6NUS8 523 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 TTC23LQ6PF05 361 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 CNSTQ6PJW8 725 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 ZDHHC24Q6UX98 284 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 ZNF574Q6ZN55 896 aaPredicted RBP14.82□□□□□ -0.04
LITAF-217ENST00000575426 RAB11FIP2Q7L804 512 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 OOSP2Q86WS3 158 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 CNTN4Q8IWV2 1026 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 SLC22A15Q8IZD6 547 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 FBXO39Q8N4B4 442 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 CFAP61Q8NHU2 1237 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 LCN9Q8WX39 176 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 SEC14L1Q92503 715 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 CDKL2Q92772 493 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 FAM136AQ96C01 138 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 LIN37Q96GY3 246 aaPredicted RBP14.82□□□□□ -0.04
LITAF-217ENST00000575426 CCDC74BQ96LY2 380 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 CMKLR1Q99788 373 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 WDR83Q9BRX9 315 aaKnown RBP14.82□□□□□ -0.04
LITAF-217ENST00000575426 TSPYL1Q9H0U9 437 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 SRMSQ9H3Y6 488 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 LATS2Q9NRM7 1088 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 NSMCE4AQ9NXX6 385 aa14.82□□□□□ -0.04
LITAF-217ENST00000575426 DMGDHQ9UI17 866 aaKnown RBP14.82□□□□□ -0.04
LITAF-217ENST00000575426 TDRKHQ9Y2W6 561 aaKnown RBP14.82□□□□□ -0.04
LITAF-217ENST00000575426 IGHV5-10-1A0A0J9YXX1 117 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 A8MU76 341 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 VPS26AO75436 327 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 AHSGP02765 367 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 F7P08709 466 aaPredicted RBP14.81□□□□□ -0.04
LITAF-217ENST00000575426 MPSTP25325 297 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 RBMS1P29558 406 aaKnown RBP14.81□□□□□ -0.04
LITAF-217ENST00000575426 SSTR1P30872 391 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 CSF2RBP32927 897 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 CSTF2P33240 577 aaKnown RBP eCLIP14.81□□□□□ -0.04
LITAF-217ENST00000575426 PDX1P52945 283 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 GABREP78334 506 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 CFHR1Q03591 330 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 PRKAA1Q13131 559 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 PRKG2Q13237 762 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 IRGCQ6NXR0 463 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 TRMT10BQ6PF06 316 aaKnown RBP14.81□□□□□ -0.04
LITAF-217ENST00000575426 UNQ6494/PRO21346Q6UXR6 183 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 C3orf62Q6ZUJ4 267 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 TMPRSS9Q7Z410 1059 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 GALNT7Q86SF2 657 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 SLITRK4Q8IW52 837 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 LSMEM2Q8N112 164 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 ZBTB2Q8N680 514 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 OR4E2Q8NGC2 313 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 JPH3Q8WXH2 748 aaPredicted RBP14.81□□□□□ -0.04
LITAF-217ENST00000575426 GATA6Q92908 595 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 ZDHHC12Q96GR4 267 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 AARSD1Q9BTE6 412 aaKnown RBP14.81□□□□□ -0.04
LITAF-217ENST00000575426 HGH1Q9BTY7 390 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 CCDC86Q9H6F5 360 aaKnown RBP14.81□□□□□ -0.04
LITAF-217ENST00000575426 POLR1BQ9H9Y6 1135 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 KLHL3Q9UH77 587 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 SATB2Q9UPW6 733 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 CDYLQ9Y232 598 aa14.81□□□□□ -0.04
LITAF-217ENST00000575426 ANKRD12Q6UB98 2062 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 OR6C74A6NCV1 312 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 C1QTNF9BB2RNN3 333 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 AGRPO00253 132 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 HGSO14964 777 aaPredicted RBP14.8□□□□□ -0.04
LITAF-217ENST00000575426 CAPN5O15484 640 aaPredicted RBP14.8□□□□□ -0.04
LITAF-217ENST00000575426 ZNF500O60304 480 aaPredicted RBP14.8□□□□□ -0.04
LITAF-217ENST00000575426 MPOP05164 745 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 C1QTNF9P0C862 333 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 JMJD7P0C870 316 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 THRAP10827 490 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 CAPZBP47756 277 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 LSSP48449 732 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 CYP4F3Q08477 520 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 ILF2Q12905 390 aaKnown RBP14.8□□□□□ -0.04
LITAF-217ENST00000575426 RTP5Q14D33 572 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 ZNF549Q6P9A3 640 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 UNC5DQ6UXZ4 953 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 VRK3Q8IV63 474 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 IFT20Q8IY31 132 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 OR5AR1Q8NGP9 310 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 OR5K2Q8NHB8 316 aa14.8□□□□□ -0.04
LITAF-217ENST00000575426 RSC1A1Q92681 617 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms