RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	BPGM	P07738	259 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	SLC35G4	P0C7Q5	338 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	MYL2	P10916	166 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	JUND	P17535	347 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	HIST1H2AD	P20671	130 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	ATP5F1	P24539	256 aa	Predicted RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	MDH1	P40925	334 aa	Known RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	CTSK	P43235	329 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	SERPINB4	P48594	390 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	AP1S2	P56377	157 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	NAA20	P61599	178 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	NFKB2	Q00653	900 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	ASPH	Q12797	758 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	ABR	Q12979	859 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	ELOC	Q15369	112 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	TGFBI	Q15582	683 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	OR4D1	Q15615	310 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	PPP1R3A	Q16821	1122 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	UAP1L1	Q3KQV9	507 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	SBSN	Q6UWP8	590 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	UBE2R2	Q712K3	238 aa	Predicted RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	NRROS	Q86YC3	692 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	SPNS2	Q8IVW8	549 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	TRIM42	Q8IWZ5	723 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	PIGK	Q92643	395 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	TFG	Q92734	400 aa	Predicted RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	HIST1H2AH	Q96KK5	128 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	HIST1H2AJ	Q99878	128 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	H2AFJ	Q9BTM1	129 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	UNK	Q9C0B0	810 aa	Known RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	ZDHHC5	Q9C0B5	715 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	OSGEPL1	Q9H4B0	414 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	TMEM74B	Q9NUR3	256 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	DNAJC28	Q9NX36	388 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	NUDT4	Q9NZJ9	180 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	CPSF2	Q9P2I0	782 aa	Known RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	SPAST	Q9UBP0	616 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	APOBEC3B	Q9UH17	382 aa	Known RBP	11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	KLF15	Q9UIH9	416 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	IKZF3	Q9UKT9	509 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	KCNK6	Q9Y257	313 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	PLEKHM1	Q9Y4G2	1056 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116	HEBP2	Q9Y5Z4	205 aa		11.63	□□□□□ -0.55
PRPF8-212	ENST00000575116		A0A1B0GVT2	93 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	PABPN1L	A6NDY0	278 aa	Known RBP	11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	OR5K4	A6NMS3	321 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	TK2	O00142	265 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	POLR3G	O15318	223 aa	Predicted RBP	11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	DLX3	O60479	287 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	IPO13	O94829	963 aa	Known RBP	11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	MTHFD2	P13995	350 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	SLC2A4	P14672	509 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	MAP4	P27816	1152 aa	Known RBP	11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	ALDH3A1	P30838	453 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	ACTR1B	P42025	376 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	HAL	P42357	657 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	RXRG	P48443	463 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	RPIA	P49247	311 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	DNAJB13	P59910	316 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	ACTR1A	P61163	376 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	IRX4	P78413	519 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	PCLAF	Q15004	111 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	METTL2B	Q6P1Q9	378 aa	Known RBP	11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	TTC23L	Q6PF05	361 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	LAYN	Q6UX15	382 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	PRR23B	Q6ZRT6	265 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	FRA10AC1	Q70Z53	315 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	GKN2	Q86XP6	184 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	NUDCD3	Q8IVD9	361 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	TBC1D21	Q8IYX1	336 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	RAB3IL1	Q8TBN0	382 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	MGARP	Q8TDB4	240 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	DYDC1	Q8WWB3	177 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	CKAP2	Q8WWK9	683 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	DLG3	Q92796	817 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	CCDC138	Q96M89	665 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	PAIP2	Q9BPZ3	127 aa	Known RBP	11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	WWP1	Q9H0M0	922 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	OXSM	Q9NWU1	459 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	POLG2	Q9UHN1	485 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	ADAMTS6	Q9UKP5	1117 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	PDE10A	Q9Y233	779 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	PCDHGA5	Q9Y5G8	931 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	ST14	Q9Y5Y6	855 aa		11.62	□□□□□ -0.55
PRPF8-212	ENST00000575116	SUPT3H	B4E1H0	165 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	STX16-NPEPL1	H3BU86	382 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	STX16	O14662	325 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	FFAR2	O15552	330 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	TRIM13	O60858	407 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	H2AFY	O75367	372 aa	Known RBP	11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	SUPT3H	O75486	399 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	EPN2	O95208	641 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	C1orf105	O95561	183 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	S100B	P04271	92 aa	Predicted RBP	11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	ANXA5	P08758	320 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	F3	P13726	295 aa		11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	AK4	P27144	223 aa	Predicted RBP	11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	RPL10	P27635	214 aa	Known RBP	11.61	□□□□□ -0.55
PRPF8-212	ENST00000575116	NDUFS1	P28331	727 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms