RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 NXPH1P58417 271 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 PDZD3Q86UT5 571 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 CKAP2Q8WWK9 683 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 WWP1Q9H0M0 922 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 TMEM74BQ9NUR3 256 aa23.5■■□□□ 1.35
ATPAF1-213ENST00000574428 TNRC6BQ9UPQ9 1833 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 SRRM3A6NNA2 597 aaPredicted RBP23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 A8MT66 165 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 VILLO15195 856 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 C8GP07360 202 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 NEFHP12036 1026 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 TAC1P20366 129 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 BGNP21810 368 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 CLCNKAP51800 687 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 LRP8Q14114 963 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 TGFBIQ15582 683 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 PHACTR4Q8IZ21 702 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 ZC3H10Q96K80 434 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 RMDN2Q96LZ7 410 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 TRNAU1APQ9NX07 287 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 ACSL5Q9ULC5 683 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 WDR37Q9Y2I8 494 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 OARD1Q9Y530 152 aa23.49■■□□□ 1.35
ATPAF1-213ENST00000574428 CCDC189A1A4V9 331 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 SYCE1LA8MT33 242 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 GFYI3L273 518 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 SNX2O60749 519 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 KCNJ13O60928 360 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 SMIM24O75264 130 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 SLC35G4P0C7Q5 338 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 ATP5F1P24539 256 aaPredicted RBP23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 SEC24CP53992 1094 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 C21orf59P57076 290 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 PDK4Q16654 411 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 SLC30A9Q6PML9 568 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 BCAS4Q8TDM0 211 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 PHF21BQ96EK2 531 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 ACSS2Q9NR19 701 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 OXSMQ9NWU1 459 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 SIRPGQ9P1W8 387 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 PDE10AQ9Y233 779 aa23.48■■□□□ 1.35
ATPAF1-213ENST00000574428 KRT87PA6NCN2 255 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PSIP1O75475 530 aaKnown RBP23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 GUCA1CO95843 209 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 TPBGLP0DKB5 382 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 GFAPP14136 432 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 IDSP22304 550 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 ACADLP28330 430 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 ACTR1BP42025 376 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 BDKRB1P46663 353 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 ACTR1AP61163 376 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 SP140Q13342 867 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 SIM2Q14190 667 aaPredicted RBP23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 CHI3L2Q15782 390 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PFKFB4Q16877 469 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 ZCCHC23Q6ZST2 131 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 RASGRP3Q8IV61 690 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 FOPNLQ96NB1 174 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 SLC12A9Q9BXP2 914 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 ZDHHC5Q9C0B5 715 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PARVBQ9HBI1 364 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PRDM8Q9NQV8 689 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 CD274Q9NZQ7 290 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PILRBQ9UKJ0 227 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PCDHGA2Q9Y5H1 932 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 CFAP20Q9Y6A4 193 aaKnown RBP23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 USP34Q70CQ2 3546 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 SPAG17Q6Q759 2223 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 A0A1B0GVT2 93 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PDZK1P1A8MUH7 402 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 ARHGEF33A8MVX0 844 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 CELA2BP08218 269 aaPredicted RBP23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 FGF3P11487 239 aaPredicted RBP23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 JUNDP17535 347 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 ZSCAN26Q16670 478 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 MBOAT1Q6ZNC8 495 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 NRROSQ86YC3 692 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PTGR2Q8N8N7 351 aaPredicted RBP23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 PIGKQ92643 395 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 MAGEB18Q96M61 343 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 NUDT4Q9NZJ9 180 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 TBC1D29Q9UFV1 150 aa23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 APOBEC3BQ9UH17 382 aaKnown RBP23.47■■□□□ 1.35
ATPAF1-213ENST00000574428 A0A1B0GTW7 788 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 PRR33A8MZF0 331 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 SLC16A5O15375 505 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 FFAR2O15552 330 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 GALR2O43603 387 aaPredicted RBP23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 GNSP15586 552 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 CYP2A7P20853 494 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 BLKP51451 505 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 ILF3Q12906 894 aaKnown RBP eCLIP23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 TEAD4Q15561 434 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 FBXO48Q5FWF7 155 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 PRAMEF14Q5SWL7 426 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 LIPMQ5VYY2 423 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 CES4AQ5XG92 561 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 PRR23BQ6ZRT6 265 aa23.46■■□□□ 1.35
ATPAF1-213ENST00000574428 FBXO39Q8N4B4 442 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms