RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ZNF778Q96MU6 729 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 RANBP9Q96S59 729 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 OR52A5Q9H2C5 316 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 CASS4Q9NQ75 786 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 FGF21Q9NSA1 209 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 JRKLQ9Y4A0 524 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 HEMK1Q9Y5R4 338 aaPredicted RBP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 ATMQ13315 3056 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 B8ZZF3 427 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 QSOX1O00391 747 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 LIN7AO14910 233 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ZSCAN12O43309 604 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 OR1I1O60431 355 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 TIAF1O95411 115 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ZBTB11O95625 1053 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 NTRK1P04629 796 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 GSTM1P09488 218 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 PLA2G2AP14555 144 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ITGB6P18564 788 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 TCN2P20062 427 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 CD151P48509 253 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 CSE1LP55060 971 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 SESN2P58004 480 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 GSTM4Q03013 218 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 CDC20Q12834 499 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 RPA4Q13156 261 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 GPR19Q15760 415 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ZNF658BQ4V348 819 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ATP1A1-AS1Q5TC04 95 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 PWWP2BQ6NUJ5 590 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 PACS1Q6VY07 963 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 NLRP9Q7RTR0 991 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 PRICKLE2Q7Z3G6 844 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 PRELID2Q8N945 189 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 OR52E1Q8NGJ3 308 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 CATSPER2Q96P56 530 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 NRTNQ99748 197 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 XKR8Q9H6D3 395 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 MVB12BQ9H7P6 319 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 SEMA5BQ9P283 1151 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ANAPC5Q9UJX4 755 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 DRG1Q9Y295 367 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ZKSCAN5Q9Y2L8 839 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 TCAF1Q9Y4C2 921 aa12.35□□□□□ -0.43
NPLOC4-213ENST00000573519 ATRXP46100 2492 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 SLC9B1P1A6NJY1 282 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 USP27XA6NNY8 438 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 F8W8V4 182 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 MATN2O00339 956 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 BTN3A3O00478 584 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 BTN3A1O00481 513 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 MAP3K7O43318 606 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 SLC28A2O43868 658 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 MT-ND3P03897 115 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 SFTPCP11686 197 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 F8A1P23610 371 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 PSMA3P25788 255 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 OAS2P29728 719 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 CCR10P46092 362 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 POLE2P56282 527 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 TUBB4BP68371 445 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 CRADDP78560 199 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 MC1RQ01726 317 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 TRIP13Q15645 432 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 DEFB109BQ30KR1 87 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 DRICH1Q6PGQ1 229 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 C4orf22Q6V702 233 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 AMIGO1Q86WK6 493 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 TMEM126BQ8IUX1 230 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 D2HGDHQ8N465 521 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 OR5AR1Q8NGP9 310 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 COG1Q8WTW3 980 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 PDLIM2Q96JY6 352 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 PBKQ96KB5 322 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 AP1M1Q9BXS5 423 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 KLHL25Q9H0H3 589 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 FANCEQ9HB96 536 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 CHRAC1Q9NRG0 131 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 POMT2Q9UKY4 750 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 PADI1Q9ULC6 663 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 RIMKLBQ9ULI2 386 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 ASF1AQ9Y294 204 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 TDRKHQ9Y2W6 561 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 PCDHB3Q9Y5E6 796 aa12.34□□□□□ -0.43
NPLOC4-213ENST00000573519 KALRNO60229 2985 aa12.33□□□□□ -0.43
NPLOC4-213ENST00000573519 C2orf74A8MZ97 194 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 SCRG1O75711 98 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 PRDX3P30048 256 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 PPARGP37231 505 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 VPS41P49754 854 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 NFKB2Q00653 900 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 ERV3-1Q14264 604 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 SEMA3AQ14563 771 aa12.33□□□□□ -0.44
NPLOC4-213ENST00000573519 PCID2Q5JVF3 399 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms