RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CXCL17Q6UXB2 119 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 GCNT7Q6ZNI0 430 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 SERINC5Q86VE9 423 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CFAP52Q8N1V2 620 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CARNMT1Q8N4J0 409 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 SVOPQ8N4V2 548 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 PIK3C3Q8NEB9 887 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 GPR152Q8TDT2 470 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 EXOC2Q96KP1 924 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 MROQ9BYG7 248 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 WWOXQ9NZC7 414 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ASB1Q9Y576 335 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 PCDHB1Q9Y5F3 818 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 TTC3P53804 2025 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 PRMT5O14744 637 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-207ENST00000572253 INMTO95050 263 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 OAZ2O95190 189 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 NADKO95544 446 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-207ENST00000572253 RYKP34925 604 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 DCTP40126 519 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 HALP42357 657 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 GNPDA1P46926 289 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ARPP19P56211 112 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 KCNC4Q03721 635 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ABRAXAS2Q15018 415 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CTXN3Q4LDR2 81 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 RFTN2Q52LD8 501 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-207ENST00000572253 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 FAM86B1Q8N7N1 296 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 OR52E4Q8NGH9 312 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 MCOLN3Q8TDD5 553 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 FAM193BQ96PV7 902 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-207ENST00000572253 OR52E6Q96RD3 313 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ACTL8Q9H568 366 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 PRM3Q9NNZ6 103 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 BPIFA1Q9NP55 256 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 TRIM17Q9Y577 477 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 PCDHGA4Q9Y5G9 962 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 RAI2Q9Y5P3 530 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 A0A0D9SEW6 157 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 F8W810 466 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 SEC22BO75396 215 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CREG1O75629 220 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 AGXTP21549 392 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 PIGAP37287 484 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 SLC11A2P49281 568 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CTU2Q2VPK5 515 aaKnown RBP10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ZNF691Q5VV52 312 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ATG9BQ674R7 924 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 NEK10Q6ZWH5 1172 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 HS3ST5Q8IZT8 346 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 SGCDQ92629 289 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 GTF2H4Q92759 462 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 ALPK1Q96QP1 1244 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 FAM126AQ9BYI3 521 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-207ENST00000572253 CLPBQ9H078 707 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 RMND5AQ9H871 391 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 OPTCQ9UBM4 332 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 DHRS7Q9Y394 339 aa10.57□□□□□ -0.72
CCDC40-207ENST00000572253 KRBA1A5PL33 1030 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 TRIM43BA6NCK2 446 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 FFAR2O15552 330 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 XYLBO75191 536 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 ULK1O75385 1050 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 PGRP06401 933 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 IGFBP5P24593 272 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 OR1G1P47890 313 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 ST13P50502 369 aaKnown RBP10.56□□□□□ -0.72
CCDC40-207ENST00000572253 AQP6Q13520 282 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 OXA1LQ15070 435 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 SGO1Q5FBB7 561 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 ZC3H12BQ5HYM0 836 aaKnown RBP10.56□□□□□ -0.72
CCDC40-207ENST00000572253 TMEM132CQ8N3T6 1108 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 LIX1Q8N485 282 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 ATAD1Q8NBU5 361 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 FKBP10Q96AY3 582 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 APOL4Q9BPW4 351 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 LRTM1Q9HBL6 345 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 NECTIN3Q9NQS3 549 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 KLQ9UEF7 1012 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 PRG3Q9Y2Y8 225 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-207ENST00000572253 FAM220BPB1ANY3 271 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 ANKRD28O15084 1053 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 GUCA1CO95843 209 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 RHOCP08134 193 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 HOXD9P28356 352 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-207ENST00000572253 IDUAP35475 653 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 ISL1P61371 349 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 CACNG1Q06432 222 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 PTGR1Q14914 329 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 PON2Q15165 354 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 SPANXN4Q5MJ08 99 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 FAM9CQ8IZT9 166 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 PDLIM5Q96HC4 596 aaKnown RBP10.56□□□□□ -0.72
CCDC40-207ENST00000572253 APOL5Q9BWW9 433 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 RETREG1Q9H6L5 497 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 ZFP14Q9HCL3 533 aa10.56□□□□□ -0.72
CCDC40-207ENST00000572253 DCAF13Q9NV06 445 aaKnown RBP10.56□□□□□ -0.72
CCDC40-207ENST00000572253 MYO16Q9Y6X6 1858 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms