RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 GSTM1P09488 218 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 EBLN1P0CF75 366 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 PRSS56P0CW18 603 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 FOLR1P15328 257 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 TCN2P20062 427 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 MSNP26038 577 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 DLSTP36957 453 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 FDFT1P37268 417 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 HSD11B2P80365 405 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 GSTM4Q03013 218 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 CDH17Q12864 832 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 KCNAB1Q14722 419 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 DBN1Q16643 649 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 PPP1R21Q6ZMI0 780 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 BPHLQ86WA6 291 aaPredicted RBP12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 SLC13A5Q86YT5 568 aaPredicted RBP12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 PIANPQ8IYJ0 282 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 CARFQ8N187 725 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 CCDC89Q8N998 374 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 ACVR1CQ8NER5 493 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 OR52K1Q8NGK4 314 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 LCN9Q8WX39 176 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 CDKN2AIPNLQ96HQ2 116 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 REPIN1Q9BWE0 567 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 SOHLH2Q9NX45 425 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 SMARCAL1Q9NZC9 954 aa12.04□□□□□ -0.48
CTDNEP1-205ENST00000570828 HEATR9A2RTY3 570 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 GSAPA4D1B5 854 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 GOLGA6L3A6NEY3 463 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 QSOX1O00391 747 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 AP2A2O94973 939 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 CCNYL3P0C7X3 344 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 ITGB6P18564 788 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 POLR2CP19387 275 aaPredicted RBP12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 NSG1P42857 185 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 ARCN1P48444 511 aaKnown RBP12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 TUBB4BP68371 445 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 RPA4Q13156 261 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 KCNAB2Q13303 367 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 LAMB3Q13751 1172 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 TUBB2AQ13885 445 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 ITIH4Q14624 930 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 RPS6KA1Q15418 735 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 CCDC38Q502W7 563 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 TMTC4Q5T4D3 741 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 C16orf46Q6P387 395 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 CLDN19Q8N6F1 224 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 OR4E2Q8NGC2 313 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 FCRL4Q96PJ5 515 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 FERD3LQ96RJ6 166 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 TUBB2BQ9BVA1 445 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 SLC25A18Q9H1K4 315 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 OR52A5Q9H2C5 316 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 SRMSQ9H3Y6 488 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 MVB12BQ9H7P6 319 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 ETNK1Q9HBU6 452 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 RAB6BQ9NRW1 208 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 FGF21Q9NSA1 209 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 TUBD1Q9UJT1 453 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 KCND3Q9UK17 655 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 PADI1Q9ULC6 663 aa12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 MRPS18BQ9Y676 258 aaKnown RBP12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 ZNF106Q9H2Y7 1883 aaKnown RBP12.03□□□□□ -0.48
CTDNEP1-205ENST00000570828 TENM4Q6N022 2769 aa12.02□□□□□ -0.48
CTDNEP1-205ENST00000570828 CCDC162PA2VCL2 907 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 F8W8V4 182 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 KATNA1O75449 491 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 SUN1O94901 812 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 TIAF1O95411 115 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 FTH1P02794 183 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 CDH3P22223 829 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 OAS2P29728 719 aaKnown RBP12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 PREPP48147 710 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 CD151P48509 253 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 SNX1Q13596 522 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 DEFB109BQ30KR1 87 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZNF658BQ4V348 819 aaPredicted RBP12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 SYTL3Q4VX76 610 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 CRTC2Q53ET0 693 aaPredicted RBP12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 MEI1Q5TIA1 1274 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 PWWP2BQ6NUJ5 590 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 AFTPHQ6ULP2 937 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 PACS1Q6VY07 963 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 CERS6Q6ZMG9 384 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 MICALCLQ6ZW33 695 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 TMEM126BQ8IUX1 230 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 D2HGDHQ8N465 521 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR8K5Q8NH50 307 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 APOBEC4Q8WW27 367 aaKnown RBP12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 TTC1Q99614 292 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 HGH1Q9BTY7 390 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 FANCEQ9HB96 536 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 PAK5Q9P286 719 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 POMT2Q9UKY4 750 aa12.02□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR51F1A6NGY5 319 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms