RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 OR11G2Q8NGC1 345 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 HSPH1Q92598 858 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 ARSGQ96EG1 525 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 THOC3Q96J01 351 aaKnown RBP6.94□□□□□ -1.3
SMG6-205ENST00000570659 BTBD6Q96KE9 485 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 FER1L6-AS2Q96M78 137 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 CD180Q99467 661 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 SPOCK3Q9BQ16 436 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 SOX17Q9H6I2 414 aaPredicted RBP6.94□□□□□ -1.3
SMG6-205ENST00000570659 RUBCNLQ9H714 662 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 KIR3DX1Q9H7L2 352 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 ZWILCHQ9H900 591 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 SYNPO2LQ9H987 977 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 PCDH18Q9HCL0 1135 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 RBM22Q9NW64 420 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMG6-205ENST00000570659 SPHK1Q9NYA1 384 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 ADAM21Q9UKJ8 722 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 G3BP2Q9UN86 482 aaKnown RBP6.94□□□□□ -1.3
SMG6-205ENST00000570659 ZNF711Q9Y462 761 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 TTLL3Q9Y4R7 772 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 ZANQ9Y493 2812 aa6.94□□□□□ -1.3
SMG6-205ENST00000570659 NKX2-6A6NCS4 301 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 C9J4A7 227 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 E7EQ34 232 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 KCNK1O00180 336 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 PEX12O00623 359 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 FFAR3O14843 346 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 GPR42O15529 346 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 MAN1A2O60476 641 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 SLC19A2O60779 497 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 CLDN14O95500 239 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 MT-CYBP00156 380 aaPredicted RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 CALB1P05937 261 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 PYGLP06737 847 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 POLBP06746 335 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 CAPN3P20807 821 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 HTR7P34969 479 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 HADHAP40939 763 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 AIF1P55008 147 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 DCDC1P59894 354 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 GBE1Q04446 702 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 GALNT2Q10471 571 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 GTF3C1Q12789 2109 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 AIMP2Q13155 320 aaKnown RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 BECN1Q14457 450 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 DPYSL2Q16555 572 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 NKG7Q16617 165 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 CYP2A13Q16696 494 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 ZNF658BQ4V348 819 aaPredicted RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 RNFT1Q5M7Z0 435 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 AGAP7PQ5VUJ5 663 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 METRNLQ641Q3 311 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 RHBDD2Q6NTF9 364 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 RPUSD3Q6P087 351 aaKnown RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 TMEM220Q6QAJ8 160 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 TMCO3Q6UWJ1 677 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 TMEM207Q6UWW9 146 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 OOSP2Q86WS3 158 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 ZNF677Q86XU0 584 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 RBM12BQ8IXT5 1001 aaKnown RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 SIRT6Q8N6T7 355 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 WFDC11Q8NEX6 87 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 OR8K5Q8NH50 307 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 SPATA22Q8NHS9 363 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 BRIX1Q8TDN6 353 aaKnown RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 PTERQ96BW5 349 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 C12orf66Q96MD2 445 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 AGAP4Q96P64 663 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 UCK2Q9BZX2 261 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 POLR1EQ9GZS1 481 aaKnown RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 ZNF160Q9HCG1 818 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 IL26Q9NPH9 171 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 C1GALT1Q9NS00 363 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMG6-205ENST00000570659 ZNF358Q9NW07 568 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 PKD2L2Q9NZM6 624 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 IFT80Q9P2H3 777 aaPredicted RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 ZNF835Q9Y2P0 537 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 MEMO1Q9Y316 297 aa6.93□□□□□ -1.3
SMG6-205ENST00000570659 LUC7L2Q9Y383 392 aaKnown RBP6.93□□□□□ -1.3
SMG6-205ENST00000570659 GSAPA4D1B5 854 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 OR2B3O76000 313 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 IPO13O94829 963 aaKnown RBP6.92□□□□□ -1.3
SMG6-205ENST00000570659 WDPCPO95876 746 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 MSL3P1P0C860 447 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 HLA-DPA1P20036 260 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 MMP11P24347 488 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 PDHA2P29803 388 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 CHRNA4P43681 627 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 OR1D4P47884 311 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 CDH6P55285 790 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 ADAM8P78325 824 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 DCDP81605 110 aaKnown RBP6.92□□□□□ -1.3
SMG6-205ENST00000570659 SLC25A11Q02978 314 aaKnown RBP6.92□□□□□ -1.3
SMG6-205ENST00000570659 XRCC4Q13426 336 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 CEBPEQ15744 281 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 ASIC2Q16515 512 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 DPCR1Q3MIW9 517 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 RALGPS1Q5JS13 557 aa6.92□□□□□ -1.3
SMG6-205ENST00000570659 FNBP1LQ5T0N5 605 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms