RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 UQCRHP07919 91 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 VDRP11473 427 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 FDPSP14324 419 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 GNLYP22749 145 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 DNASE1P24855 282 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 HNRNPH1P31943 449 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 CTNNA1P35221 906 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 MATR3P43243 847 aaKnown RBP eCLIP3.67□□□□□ -1.82
UBR1-211ENST00000569971 TNNT3P45378 269 aaPredicted RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 CRKLP46109 303 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 ZNF75DP51815 510 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 CDH13P55290 713 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 TRAF1Q13077 416 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 CTTNQ14247 550 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 SNAPC1Q16533 368 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 Q4G0T1 1027 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 CAVIN4Q5BKX8 364 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 SUSD4Q5VX71 490 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 NSUN5P2Q63ZY6 315 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 PARM1Q6UWI2 310 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 SUSD1Q6UWL2 747 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 RBPMS2Q6ZRY4 209 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 Q6ZSV7 163 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 CACNA2D4Q7Z3S7 1137 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 LDB1Q86U70 411 aaPredicted RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 ADIPOR2Q86V24 386 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 PLA2G4DQ86XP0 818 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 THNSL1Q8IYQ7 743 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 RASGEF1CQ8N431 466 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 RBM15BQ8NDT2 890 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 PRSS3P2Q8NHM4 247 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 KIF18AQ8NI77 898 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 RND1Q92730 232 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 GRAMD2BQ96HH9 432 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 ZNF830Q96NB3 372 aaPredicted RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 DDOQ99489 341 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 UBAC1Q9BSL1 405 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 HAUS8Q9BT25 410 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 NYXQ9GZU5 481 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 KCNK15Q9H427 330 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 SEBOXQ9HB31 216 aaPredicted RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 FZD3Q9NPG1 666 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 OLAHQ9NV23 265 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 LARSQ9P2J5 1176 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 CLIP2Q9UDT6 1046 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 TUBE1Q9UJT0 475 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 GTF3C4Q9UKN8 822 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 ACSL5Q9ULC5 683 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 TTC7AQ9ULT0 858 aaPredicted RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 PCDHA7Q9UN72 937 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 CDC14AQ9UNH5 594 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 WBP11Q9Y2W2 641 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.67□□□□□ -1.82
UBR1-211ENST00000569971 TCHHQ07283 1943 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 UBN2Q6ZU65 1347 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 PHLPP1O60346 1717 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 C4AP0C0L4 1744 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 C4BP0C0L5 1744 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 NRAPQ86VF7 1730 aa3.67□□□□□ -1.82
UBR1-211ENST00000569971 NID2Q14112 1375 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 ZNF831Q5JPB2 1677 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 DOCK2Q92608 1830 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 EDDM13A0A1B0GTR0 161 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 A0A1B0GVL5 298 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 KANSL1LA0AUZ9 987 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 TMEM8BA6NDV4 472 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 B4DGG1 531 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CLGNO14967 610 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 EPN2O95208 641 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 VNN2O95498 520 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CELA2AP08217 269 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CALM1P0DP23 149 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CALM2P0DP24 149 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CALM3P0DP25 149 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 PCP11498 1178 aaKnown RBP3.66□□□□□ -1.82
UBR1-211ENST00000569971 CMA1P23946 247 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 PTAFRP25105 342 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 OAS2P29728 719 aaKnown RBP3.66□□□□□ -1.82
UBR1-211ENST00000569971 MMP13P45452 471 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CCR10P46092 362 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 RASSF2P50749 326 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 ARSEP51690 589 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 NDUFA8P51970 172 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 GSDMDP57764 484 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 AKAP17AQ02040 695 aaKnown RBP3.66□□□□□ -1.82
UBR1-211ENST00000569971 RALGDSQ12967 914 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 GPR18Q14330 331 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 KRT33BQ14525 404 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 SLC39A14Q15043 492 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 EFNB3Q15768 340 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 ASIC2Q16515 512 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 MYLK3Q32MK0 819 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CBWD6Q4V339 395 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 MTX3Q5HYI7 312 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CBWD3Q5JTY5 395 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 MANEAQ5SRI9 462 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 C10orf25Q5T742 122 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 CST9LP1Q5W188 147 aa3.66□□□□□ -1.82
UBR1-211ENST00000569971 DHRS7BQ6IAN0 325 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms