RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NRTNQ99748 197 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 MAP3K3Q99759 626 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 ZPBPQ9BS86 351 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 HGH1Q9BTY7 390 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 DDX47Q9H0S4 455 aaKnown RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 P2RY12Q9H244 342 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 MVB12BQ9H7P6 319 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 XAB2Q9HCS7 855 aaKnown RBP12.68□□□□□ -0.38
CNOT1-220ENST00000569916 HRASLS2Q9NWW9 162 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 PILRAQ9UKJ1 303 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 CDYLQ9Y232 598 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 PCDHB11Q9Y5F2 797 aa12.68□□□□□ -0.38
CNOT1-220ENST00000569916 IQCF5A8MTL0 148 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 GOLGA8KD6RF30 607 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 F8W8V4 182 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 GOLGA8TH3BQL2 631 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 GOLGA8MH3BSY2 632 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 PRMT5O14744 637 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 RAD1O60671 282 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 ITGB6P18564 788 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 POLR2CP19387 275 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 RPS3P23396 243 aaKnown RBP eCLIP12.67□□□□□ -0.383e-8■□□□□ 9.6
CNOT1-220ENST00000569916 CCR7P32248 378 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 MAGEA3P43357 314 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 ARCN1P48444 511 aaKnown RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 KPNA2P52292 529 aaKnown RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 PLOD1Q02809 727 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 FOXM1Q08050 763 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 TYSND1Q2T9J0 566 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 SOWAHCQ53LP3 525 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 MANEAQ5SRI9 462 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 RNASEH2BQ5TBB1 312 aaKnown RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 AGGF1Q8N302 714 aaeCLIP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 OR4E2Q8NGC2 313 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 OR5AR1Q8NGP9 310 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 LCN9Q8WX39 176 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 SLCO2A1Q92959 643 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 PPM1MQ96MI6 270 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 OR6C1Q96RD1 312 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 UBL7Q96S82 380 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 NAPGQ99747 312 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 CARD6Q9BX69 1037 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 SRMSQ9H3Y6 488 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 TFB2MQ9H5Q4 396 aaKnown RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 POMT2Q9UKY4 750 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 ASF1AQ9Y294 204 aa12.67□□□□□ -0.38
CNOT1-220ENST00000569916 TMEM184BQ9Y519 407 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-220ENST00000569916 FAM237BA0A1B0GVD1 139 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 BTN3A3O00478 584 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 BTN3A1O00481 513 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 GPC4O75487 556 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 STK17BO94768 372 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 DLGAP3O95886 979 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 FGF5P12034 268 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 WT1P19544 449 aaPredicted RBP12.66□□□□□ -0.38
CNOT1-220ENST00000569916 ATP1A2P50993 1020 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
CNOT1-220ENST00000569916 PRKG2Q13237 762 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 PTK6Q13882 451 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 KCNAB1Q14722 419 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 CTSL3PQ5NE16 218 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 ARMC6Q6NXE6 501 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 CASC4Q6P4E1 433 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 TIPARPQ7Z3E1 657 aaKnown RBP12.66□□□□□ -0.38
CNOT1-220ENST00000569916 LRRC6Q86X45 466 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 KMT5CQ86Y97 462 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 VRK3Q8IV63 474 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 PPIL6Q8IXY8 311 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 TBC1D21Q8IYX1 336 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 SLC22A15Q8IZD6 547 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 CACNA2D3Q8IZS8 1091 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 CARFQ8N187 725 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 OTUD6BQ8N6M0 293 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 ZNF669Q96BR6 464 aaPredicted RBP12.66□□□□□ -0.38
CNOT1-220ENST00000569916 CAPZA3Q96KX2 299 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 TSSK1BQ9BXA7 367 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 SAMD15Q9P1V8 674 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 PCYOX1Q9UHG3 505 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 GNPTGQ9UJJ9 305 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 ICKQ9UPZ9 632 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 MGAQ8IWI9 3026 aa12.66□□□□□ -0.38
CNOT1-220ENST00000569916 ZCWPW2A0A1B0GU75 182 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 UBA6A0AVT1 1052 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 SDR42E2A6NKP2 422 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 MATN2O00339 956 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 DNALI1O14645 258 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 NDUFS3O75489 264 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 EBLN1P0CF75 366 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 TPBGLP0DKB5 382 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 FOLR1P15328 257 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 ZNF28P17035 718 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 PAMP19021 973 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 OGNP20774 298 aaKnown RBP12.65□□□□□ -0.38
CNOT1-220ENST00000569916 AOAHP28039 575 aa12.65□□□□□ -0.38
CNOT1-220ENST00000569916 PTGIRP43119 386 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms