RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 LRRTM2O43300 516 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 SERPINC1P01008 464 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 AGTP01019 485 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 PDHA2P29803 388 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 PBX1P40424 430 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 CDKN1CP49918 316 aaPredicted RBP14.39□□□□□ -0.11
USB1-214ENST00000568848 KRT33BQ14525 404 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 PDK1Q15118 436 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 PRKD1Q15139 912 aaPredicted RBP14.39□□□□□ -0.11
USB1-214ENST00000568848 KAZNQ674X7 775 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 CCDC70Q6NSX1 233 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 MFSD7Q6UXD7 560 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 GALNT16Q8N428 558 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 DTWD1Q8N5C7 304 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 OR52E1Q8NGJ3 308 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 BRSK1Q8TDC3 778 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 LCN9Q8WX39 176 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 MARVELD3Q96A59 401 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 SRMSQ9H3Y6 488 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 FANCEQ9HB96 536 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 LATS2Q9NRM7 1088 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 FAM153AQ9UHL3 310 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 PLAGL1Q9UM63 463 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 OSGIN2Q9Y236 505 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 PCDHGB7Q9Y5F8 929 aa14.39□□□□□ -0.11
USB1-214ENST00000568848 CCDC78A2IDD5 438 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 PPP1R12AO14974 1030 aaPredicted RBP14.38□□□□□ -0.11
USB1-214ENST00000568848 ZG16O60844 167 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 GYPCP04921 128 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 UMODP07911 640 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 GRNP28799 593 aaKnown RBP14.38□□□□□ -0.11
USB1-214ENST00000568848 PRKAA1Q13131 559 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 SLC1A5Q15758 541 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 DCAF10Q5QP82 559 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 NAPRTQ6XQN6 538 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 SHISA6Q6ZSJ9 500 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 ZC3H18Q86VM9 953 aaKnown RBP14.38□□□□□ -0.11
USB1-214ENST00000568848 RAB43Q86YS6 212 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 ZNF567Q8N184 647 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 OR13C4Q8NGS5 318 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 OR2L2Q8NH16 312 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 ZNF398Q8TD17 642 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 UBE2Q2Q8WVN8 375 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 RBM41Q96IZ5 413 aaKnown RBP14.38□□□□□ -0.11
USB1-214ENST00000568848 PHF12Q96QT6 1004 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 FICDQ9BVA6 458 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 ZCCHC2Q9C0B9 1178 aaKnown RBP14.38□□□□□ -0.11
USB1-214ENST00000568848 P4HTMQ9NXG6 502 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 KLHL8Q9P2G9 620 aaPredicted RBP14.38□□□□□ -0.11
USB1-214ENST00000568848 G3BP2Q9UN86 482 aaKnown RBP14.38□□□□□ -0.11
USB1-214ENST00000568848 KLHL20Q9Y2M5 609 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 ANKRD12Q6UB98 2062 aa14.38□□□□□ -0.11
USB1-214ENST00000568848 CCDC66A2RUB6 948 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 C9J4A7 227 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 E7EQ34 232 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 RRADP55042 308 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 FANCCQ00597 558 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 ELOAQ14241 798 aaKnown RBP14.37□□□□□ -0.11
USB1-214ENST00000568848 MYBPC3Q14896 1274 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 LONRF2Q1L5Z9 754 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 FIGNQ5HY92 759 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 OR4K2Q8NGD2 314 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 OR8K5Q8NH50 307 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 MAK16Q9BXY0 300 aaKnown RBP14.37□□□□□ -0.11
USB1-214ENST00000568848 ASB8Q9H765 288 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 C1GALT1Q9NS00 363 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 SLC22A11Q9NSA0 550 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 SPHK1Q9NYA1 384 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 ACTR10Q9NZ32 417 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 CIDEBQ9UHD4 219 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 ICKQ9UPZ9 632 aa14.37□□□□□ -0.11
USB1-214ENST00000568848 H3BMH7 237 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 STX7O15400 261 aaKnown RBP14.36□□□□□ -0.11
USB1-214ENST00000568848 FOLR3P41439 243 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 ZBED6P86452 979 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 XIAPP98170 497 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 LYPLAL1Q5VWZ2 237 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 Q6ZS92 163 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 KCNMB4Q86W47 210 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 ADGRF3Q8IZF5 1079 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 METTL27Q8N6F8 245 aaPredicted RBP14.36□□□□□ -0.11
USB1-214ENST00000568848 ZNF655Q8N720 491 aaPredicted RBP14.36□□□□□ -0.11
USB1-214ENST00000568848 TTC13Q8NBP0 860 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 ACVR1CQ8NER5 493 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 SLC35G2Q8TBE7 412 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.36□□□□□ -0.11
USB1-214ENST00000568848 CTNNBL1Q8WYA6 563 aaPredicted RBP14.36□□□□□ -0.11
USB1-214ENST00000568848 CNDP1Q96KN2 507 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 GBP5Q96PP8 586 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 PITPNM3Q9BZ71 974 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 COG4Q9H9E3 785 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 SMOXQ9NWM0 555 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 NOVA2Q9UNW9 492 aaKnown RBP14.36□□□□□ -0.11
USB1-214ENST00000568848 PKP3Q9Y446 797 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 DNMT3AQ9Y6K1 912 aaPredicted RBP14.36□□□□□ -0.11
USB1-214ENST00000568848 MYO7BQ6PIF6 2116 aa14.36□□□□□ -0.11
USB1-214ENST00000568848 CCDC168Q8NDH2 2452 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms