RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 FBXO25Q8TCJ0 367 aa13.35□□□□□ -0.27
SPG7-215ENST00000566682 JPH3Q8WXH2 748 aaPredicted RBP13.35□□□□□ -0.27
SPG7-215ENST00000566682 LIN37Q96GY3 246 aaPredicted RBP13.35□□□□□ -0.27
SPG7-215ENST00000566682 DPYSL5Q9BPU6 564 aa13.35□□□□□ -0.27
SPG7-215ENST00000566682 STRADBQ9C0K7 418 aa13.35□□□□□ -0.27
SPG7-215ENST00000566682 ZMYND15Q9H091 742 aa13.35□□□□□ -0.27
SPG7-215ENST00000566682 PPANQ9NQ55 473 aaKnown RBP13.35□□□□□ -0.27
SPG7-215ENST00000566682 SLC24A2Q9UI40 661 aa13.35□□□□□ -0.27
SPG7-215ENST00000566682 SATB2Q9UPW6 733 aa13.35□□□□□ -0.27
SPG7-215ENST00000566682 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
SPG7-215ENST00000566682 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 A0A1W2PNU3 283 aaPredicted RBP13.34□□□□□ -0.27
SPG7-215ENST00000566682 ESYT3A0FGR9 886 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 H3BMM5 538 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 AGRPO00253 132 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 KPNA5O15131 536 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 EIF3HO15372 352 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPG7-215ENST00000566682 SLCO2B1O94956 709 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 MPOP05164 745 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 APOA4P06727 396 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 CHRM3P20309 590 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 NDUFS1P28331 727 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 LEPRP48357 1165 aaKnown RBP13.34□□□□□ -0.27
SPG7-215ENST00000566682 CARSP49589 748 aaKnown RBP13.34□□□□□ -0.27
SPG7-215ENST00000566682 MPP1Q00013 466 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 GUCY2DQ02846 1103 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 CYP4F3Q08477 520 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 PLCL1Q15111 1095 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 C3orf38Q5JPI3 329 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 TEDDM1Q5T9Z0 273 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 TRMT10BQ6PF06 316 aaKnown RBP13.34□□□□□ -0.27
SPG7-215ENST00000566682 CNSTQ6PJW8 725 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 OTOAQ7RTW8 1153 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 CNTN4Q8IWV2 1026 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 SLC22A15Q8IZD6 547 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 C2CD4AQ8NCU7 369 aaPredicted RBP13.34□□□□□ -0.27
SPG7-215ENST00000566682 RCBTB1Q8NDN9 531 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 WDR36Q8NI36 951 aaKnown RBP13.34□□□□□ -0.27
SPG7-215ENST00000566682 MDM1Q8TC05 714 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 PYROXD1Q8WU10 500 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 SEC14L1Q92503 715 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 RSC1A1Q92681 617 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 FAM136AQ96C01 138 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 NXPE2Q96DL1 559 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 CCDC74BQ96LY2 380 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 CNTNAP3BQ96NU0 1288 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 CNTNAP3Q9BZ76 1288 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 KIR3DX1Q9H7L2 352 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 MVB12BQ9H7P6 319 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 POLR1BQ9H9Y6 1135 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 SAYSD1Q9NPB0 183 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 LATS2Q9NRM7 1088 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 PDP2Q9P2J9 529 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 GALPQ9UBC7 116 aa13.34□□□□□ -0.27
SPG7-215ENST00000566682 DMGDHQ9UI17 866 aaKnown RBP13.34□□□□□ -0.27
SPG7-215ENST00000566682 A8MU76 341 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 E5RI56 91 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 AHSGP02765 367 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 CAPNS1P04632 268 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 THRAP10827 490 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 GABRB3P28472 473 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 LSSP48449 732 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 GABREP78334 506 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 PRKG2Q13237 762 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 TRA2AQ13595 282 aaKnown RBP eCLIP13.33□□□□□ -0.28
SPG7-215ENST00000566682 FRG1Q14331 258 aaKnown RBP13.33□□□□□ -0.28
SPG7-215ENST00000566682 TMED2Q15363 201 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 GLE1Q53GS7 698 aaKnown RBP13.33□□□□□ -0.28
SPG7-215ENST00000566682 SNAP47Q5SQN1 464 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 PLEKHS1Q5SXH7 462 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 ZNF549Q6P9A3 640 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 FOXR1Q6PIV2 292 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 RAB11FIP2Q7L804 512 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 PLXDC1Q8IUK5 500 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 ACVR1CQ8NER5 493 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 GSDMBQ8TAX9 411 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 CCDC68Q9H2F9 335 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 CCDC86Q9H6F5 360 aaKnown RBP13.33□□□□□ -0.28
SPG7-215ENST00000566682 MOCS1Q9NZB8 636 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 KLHL3Q9UH77 587 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 ASF1AQ9Y294 204 aa13.33□□□□□ -0.28
SPG7-215ENST00000566682 AKAP13Q12802 2813 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 PMS2P1A4D2B8 440 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 CAPN5O15484 640 aaPredicted RBP13.32□□□□□ -0.28
SPG7-215ENST00000566682 C9P02748 559 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 SSTR1P30872 391 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 CAPZBP47756 277 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 GFERP55789 205 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 ABRQ12979 859 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 EIF3IQ13347 325 aaKnown RBP13.32□□□□□ -0.28
SPG7-215ENST00000566682 DSG2Q14126 1118 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 C16orf72Q14CZ0 275 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 KLHL35Q6PF15 583 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 CAPN12Q6ZSI9 719 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 KIAA0408Q6ZU52 694 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 ARHGAP22Q7Z5H3 698 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 CCDC25Q86WR0 208 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 TBC1D21Q8IYX1 336 aa13.32□□□□□ -0.28
SPG7-215ENST00000566682 FBXO39Q8N4B4 442 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms