RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MAPK12P53778 367 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 GTF2BQ00403 316 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 EN1Q05925 392 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 EXOSC2Q13868 293 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 CCINQ13939 588 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 IGSF11Q5DX21 431 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 SWSAP1Q6NVH7 229 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 RCBTB1Q8NDN9 531 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 KBTBD8Q8NFY9 601 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 HTRA1Q92743 480 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 BIRC7Q96CA5 298 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 LXNQ9BS40 222 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 C8orf33Q9H7E9 229 aaPredicted RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 FBRSL1Q9HCM7 1045 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 ASAH2Q9NR71 780 aa2.88□□□□□ -1.95
CHD9-218ENST00000566029 IARS2Q9NSE4 1012 aaKnown RBP2.88□□□□□ -1.95
CHD9-218ENST00000566029 E9PQ18 207 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DFNA5O60443 496 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PTP4A3O75365 173 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TNNI1P19237 187 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CYP24A1Q07973 514 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SEMA3BQ13214 749 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MTM1Q13496 603 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PCK2Q16822 640 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 EML3Q32P44 896 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PDZK1Q5T2W1 519 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PRMT9Q6P2P2 845 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMEM81Q6P7N7 255 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 STX19Q8N4C7 294 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CCNYL1Q8N7R7 359 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FAM181AQ8N9Y4 354 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TRPM4Q8TD43 1214 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMEM190Q8WZ59 177 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FAM149B1Q96BN6 582 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MFSD3Q96ES6 412 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ADA2Q9NZK5 511 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ACTR3BQ9P1U1 418 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 INTS6Q9UL03 887 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 VPS4AQ9UN37 437 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CBY1Q9Y3M2 126 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NRCAMQ92823 1304 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 LTN1O94822 1766 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CCDC154A6NI56 674 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 H3BQ06 376 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 M0R036 132 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PLK4O00444 970 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DSCR3O14972 297 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DLX3O60479 287 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TGFB3P10600 412 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 HDCP19113 662 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MAGP20916 626 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SLC6A2P23975 617 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 HNF1BP35680 557 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FNTBP49356 437 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 RGS7P49802 495 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PRKCDQ05655 676 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 UGP2Q16851 508 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SPDYE7PQ495Y7 208 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PRPF38BQ5VTL8 546 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 ZDHHC20Q5W0Z9 365 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TXNDC8Q6A555 127 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ZNF425Q6IV72 752 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DNAJC24Q6P3W2 148 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NAPRTQ6XQN6 538 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PLD3Q8IV08 490 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DNAJA4Q8WW22 397 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 PYCR2Q96C36 320 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMCO6Q96DC7 493 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 WBP1Q96G27 269 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NARFLQ9H6Q4 476 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NECTIN3Q9NQS3 549 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TMEM161AQ9NX61 479 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DCAF16Q9NXF7 216 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 RAPGEFL1Q9UHV5 662 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TBC1D24Q9ULP9 559 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CNTNAP4Q9C0A0 1308 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CLDN24A6NM45 220 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 TK2O00142 265 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 NOS1APO75052 506 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 HLA-DRAP01903 254 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SUPT20HL2P0C7V6 817 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 PRG2P13727 222 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MMP8P22894 467 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 HRH2P25021 359 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 SHMT1P34896 483 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CDK8P49336 464 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 GSK3BP49841 420 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 CAP1Q01518 475 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 FAM83EQ2M2I3 478 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ZNF284Q2VY69 593 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ARMCX4Q5H9R4 360 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 IER5Q5VY09 327 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 C16orf86Q6ZW13 317 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 ZNF551Q7Z340 670 aaPredicted RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 RTL3Q8N8U3 475 aaKnown RBP2.87□□□□□ -1.95
CHD9-218ENST00000566029 OR7D4Q8NG98 312 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OR52K2Q8NGK3 314 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 OR6F1Q8NGZ6 308 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 MCOLN3Q8TDD5 553 aa2.87□□□□□ -1.95
CHD9-218ENST00000566029 DEDD2Q8WXF8 326 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms