RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 FAM69BQ5VUD6 431 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 ARMC6Q6NXE6 501 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 TAS2R42Q7RTR8 314 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 ACVR1CQ8NER5 493 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 OR52E1Q8NGJ3 308 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 CDKN2AIPNLQ96HQ2 116 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 FCRL4Q96PJ5 515 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 PPP1R2P1Q96PQ5 205 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 FERD3LQ96RJ6 166 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 CCM2Q9BSQ5 444 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 HGH1Q9BTY7 390 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 KLHL25Q9H0H3 589 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 SOHLH2Q9NX45 425 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 PCDHB3Q9Y5E6 796 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 COLEC10Q9Y6Z7 277 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 C17orf113A0A1B0GUU1 675 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 C21orf140B9A014 251 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 ARHGAP6O43182 974 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 PSMA3P25788 255 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 NDUFS1P28331 727 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 PMS2P54278 862 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 KRT33BQ14525 404 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 CPZQ66K79 652 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 NAPRTQ6XQN6 538 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 PRUNE1Q86TP1 453 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 TMEM126BQ8IUX1 230 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 TTC13Q8NBP0 860 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 OR1L3Q8NH93 324 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 LCN9Q8WX39 176 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 HES6Q96HZ4 224 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 KCND1Q9NSA2 647 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 ANAPC2Q9UJX6 822 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 TLK1Q9UKI8 766 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 HEBP2Q9Y5Z4 205 aa23.06■■□□□ 1.28
RAB40C-209ENST00000565511 MAST4O15021 2626 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 LRRK2Q5S007 2527 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 GSAPA4D1B5 854 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 MROH6A6NGR9 719 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 MIF4GDA9UHW6 222 aaKnown RBP23.05■■□□□ 1.28
RAB40C-209ENST00000565511 CPNE3O75131 537 aaKnown RBP23.05■■□□□ 1.28
RAB40C-209ENST00000565511 CDH3P22223 829 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 FOXN2P32314 431 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 LMAN1P49257 510 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 CACNG1Q06432 222 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 PRKG2Q13237 762 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 BOP1Q14137 746 aaKnown RBP23.05■■□□□ 1.28
RAB40C-209ENST00000565511 CYB5D1Q6P9G0 228 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 ZNF517Q6ZMY9 492 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-209ENST00000565511 UBL4BQ8N7F7 174 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 OR52K1Q8NGK4 314 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 STYXQ8WUJ0 223 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 HEXDCQ8WVB3 486 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 CHST8Q9H2A9 424 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 SRMSQ9H3Y6 488 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 COL12A1Q99715 3063 aa23.05■■□□□ 1.28
RAB40C-209ENST00000565511 CCDC162PA2VCL2 907 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 GOLGA6L9A6NEM1 432 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 PTPN4P29074 926 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 PRDX3P30048 256 aaKnown RBP23.04■■□□□ 1.28
RAB40C-209ENST00000565511 GRIA1P42261 906 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 FOXK1P85037 733 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 CHAF1BQ13112 559 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 PLEKHS1Q5SXH7 462 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 BPHLQ86WA6 291 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-209ENST00000565511 ADGRF3Q8IZF5 1079 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 MR1Q95460 341 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 PITPNM3Q9BZ71 974 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 LATS2Q9NRM7 1088 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 SMARCAL1Q9NZC9 954 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 SLC2A6Q9UGQ3 507 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 ICKQ9UPZ9 632 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 MAN2B2Q9Y2E5 1009 aa23.04■■□□□ 1.28
RAB40C-209ENST00000565511 RFPL1O75677 317 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 PTMAP06454 111 aaKnown RBP23.03■■□□□ 1.28
RAB40C-209ENST00000565511 TPBGLP0DKB5 382 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 RORAP35398 523 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 OASLQ15646 514 aaKnown RBP23.03■■□□□ 1.28
RAB40C-209ENST00000565511 UGT8Q16880 541 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 TRIM73Q86UV7 250 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 CARFQ8N187 725 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 SPC24Q8NBT2 197 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 OR5AR1Q8NGP9 310 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 OR13J1Q8NGT2 312 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 TFB2MQ9H5Q4 396 aaKnown RBP23.03■■□□□ 1.28
RAB40C-209ENST00000565511 C1GALT1Q9NS00 363 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 CCDC88CQ9P219 2028 aa23.03■■□□□ 1.28
RAB40C-209ENST00000565511 TMEM150CB9EJG8 249 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 HCRTR1O43613 425 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 CAPN1P07384 714 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 ETS1P14921 441 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 MSNP26038 577 aaKnown RBP23.02■■□□□ 1.28
RAB40C-209ENST00000565511 CD151P48509 253 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 KIF5AQ12840 1032 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 PRKAA1Q13131 559 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 SEMA5AQ13591 1074 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 BRD3Q15059 726 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 P3H1Q32P28 736 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 FAM198BQ6UWH4 519 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 DSELQ8IZU8 1212 aa23.02■■□□□ 1.28
RAB40C-209ENST00000565511 SYCE1Q8N0S2 351 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms