RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 HGH1Q9BTY7 390 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 TUBB2BQ9BVA1 445 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 TLR10Q9BXR5 811 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 FRMD8P1Q9BZ68 369 aaPredicted RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 SRMSQ9H3Y6 488 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 AKIRIN1Q9H9L7 192 aaPredicted RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 RAB6BQ9NRW1 208 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 SOHLH2Q9NX45 425 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 TUBD1Q9UJT1 453 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 PADI1Q9ULC6 663 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF148Q9UQR1 794 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 BTRCQ9Y297 605 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 HEATR9A2RTY3 570 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 SLC9B1P1A6NJY1 282 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 E7EVH7 732 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ARHGAP6O43182 974 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 OR1I1O60431 355 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 KATNA1O75449 491 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 AP2A2O94973 939 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 GOT2P00505 430 aaKnown RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 GSTM1P09488 218 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ZSCAN5DPP0CG00 497 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 CDH3P22223 829 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PRDX3P30048 256 aaKnown RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 CD151P48509 253 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 LMAN1P49257 510 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 GSTM4Q03013 218 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ACVR1Q04771 509 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PRKAA1Q13131 559 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 RPA4Q13156 261 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PRKG2Q13237 762 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 BOP1Q14137 746 aaKnown RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ERV3-1Q14264 604 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ITIH4Q14624 930 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 BRD3Q15059 726 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 RPS6KA1Q15418 735 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 KCTD19Q17RG1 926 aaPredicted RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 SKIDA1Q1XH10 827 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 TSTD2Q5T7W7 516 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PRAMEF17Q5VTA0 474 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 FAM199XQ6PEV8 388 aaPredicted RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PACS1Q6VY07 963 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PPP1R21Q6ZMI0 780 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF534Q76KX8 674 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 BPHLQ86WA6 291 aaPredicted RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PTRH1Q86Y79 214 aaKnown RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 CARFQ8N187 725 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 SLC38A9Q8NBW4 561 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 APOBEC4Q8WW27 367 aaKnown RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ELMO1Q92556 727 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 TFGQ92734 400 aaPredicted RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 HDAC10Q969S8 669 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 FCRL4Q96PJ5 515 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 ALS2CR12Q96Q35 445 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 RANBP9Q96S59 729 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PITPNM3Q9BZ71 974 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 KLHL25Q9H0H3 589 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 TFB2MQ9H5Q4 396 aaKnown RBP9.74□□□□□ -0.85
CMTM3-209ENST00000565003 XKR8Q9H6D3 395 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 MVB12BQ9H7P6 319 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 LZTFL1Q9NQ48 299 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 CASS4Q9NQ75 786 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 PCDHGA6Q9Y5G7 932 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 KCNMB2Q9Y691 235 aa9.74□□□□□ -0.85
CMTM3-209ENST00000565003 SPTBP11277 2137 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 SLC5A10A0PJK1 596 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 C21orf140B9A014 251 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 MATN2O00339 956 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 LIN7AO14910 233 aaPredicted RBP9.73□□□□□ -0.85
CMTM3-209ENST00000565003 CPNE3O75131 537 aaKnown RBP9.73□□□□□ -0.85
CMTM3-209ENST00000565003 CREG1O75629 220 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 SCRG1O75711 98 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 GAS8O95995 478 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 FTH1P02794 183 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 MT-ND3P03897 115 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 APRTP07741 180 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 CCNYL3P0C7X3 344 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 TPBGLP0DKB5 382 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 PVRP15151 417 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ST6GAL1P15907 406 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ACADLP28330 430 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 RPL22P35268 128 aaKnown RBP9.73□□□□□ -0.85
CMTM3-209ENST00000565003 RPS18P62269 152 aaKnown RBP9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ABRQ12979 859 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 GPS2Q13227 327 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 LAMB3Q13751 1172 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 SEMA3AQ14563 771 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF789Q5FWF6 425 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 AFTPHQ6ULP2 937 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ATG14Q6ZNE5 492 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 AMIGO1Q86WK6 493 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 TMEM126BQ8IUX1 230 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ADGRF3Q8IZF5 1079 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 CCDC89Q8N998 374 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 OR5AR1Q8NGP9 310 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 OR8K5Q8NH50 307 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 C9orf43Q8TAL5 461 aaPredicted RBP9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ABHD17AQ96GS6 310 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ACTL8Q9H568 366 aa9.73□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF71Q9NQZ8 489 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms