RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CRLF1O75462 422 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 CREG1O75629 220 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 FAM157CP0CG43 387 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 DMPKQ09013 629 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 RRS1Q15050 365 aaKnown RBP4.26□□□□□ -1.73
UBR1-205ENST00000564540 SCML4Q8N228 414 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 OR2T6Q8NHC8 308 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 POM121L2Q96KW2 1035 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 SGK494Q96LW2 274 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 OR6C1Q96RD1 312 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 INTS9Q9NV88 658 aaKnown RBP4.26□□□□□ -1.73
UBR1-205ENST00000564540 LARSQ9P2J5 1176 aaKnown RBP4.26□□□□□ -1.73
UBR1-205ENST00000564540 SEC63Q9UGP8 760 aaKnown RBP4.26□□□□□ -1.73
UBR1-205ENST00000564540 HACL1Q9UJ83 578 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 RIPK3Q9Y572 518 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 MMP24Q9Y5R2 645 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 IGKV3D-20A0A0C4DH25 116 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 ATP6V0E1O15342 81 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 PAPSS1O43252 624 aaPredicted RBP4.25□□□□□ -1.73
UBR1-205ENST00000564540 ARHGEF9O43307 516 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 ZWINTO95229 277 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 RAF1P04049 648 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 EDN1P05305 212 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 PSMB10P40306 273 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 SLC15A1P46059 708 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 BMXP51813 675 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 SNRPD1P62314 119 aaKnown RBP4.25□□□□□ -1.73
UBR1-205ENST00000564540 CXCL9Q07325 125 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 AIMP2Q13155 320 aaKnown RBP4.25□□□□□ -1.73
UBR1-205ENST00000564540 GPR17Q13304 367 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 MDH1BQ5I0G3 518 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 RAB41Q5JT25 222 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 OR2AJ1Q8NGZ0 328 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 OR2T11Q8NH01 316 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 RNF128Q8TEB7 428 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 NSL1Q96IY1 281 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 LINC00479Q96M42 142 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 VN1R1Q9GZP7 353 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 PLCXD1Q9NUJ7 323 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 BARHL2Q9NY43 387 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 ZNF215Q9UL58 517 aaPredicted RBP4.25□□□□□ -1.73
UBR1-205ENST00000564540 RNF215Q9Y6U7 377 aa4.25□□□□□ -1.73
UBR1-205ENST00000564540 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 A0A087WW49 117 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 AGAP14A8MT82 685 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 HEPACAM2A8MVW5 462 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 PRR32B1ATL7 298 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 B4DLN1 442 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 XRCC3O43542 346 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 CDC123O75794 336 aaPredicted RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 ZFAND5O76080 213 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 AP2A2O94973 939 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 PIGNO95427 931 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 KRT5P13647 590 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 GABRA5P31644 462 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 RXRGP48443 463 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 MRPL12P52815 198 aaKnown RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 B3GALT5-AS1P59052 145 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 CDR2Q01850 454 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 PPARDQ03181 441 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 LPAL2Q16609 132 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 KRT71Q3SY84 523 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 LINGO4Q6UY18 593 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 Q6ZSR9 355 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 HAUS6Q7Z4H7 955 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 LDB1Q86U70 411 aaPredicted RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 ZNF611Q8N823 705 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 TMEM178AQ8NBL3 297 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 C1orf131Q8NDD1 294 aaKnown RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 DBF4BQ8NFT6 615 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 ANKRD9Q96BM1 317 aaPredicted RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 NAP1L4Q99733 375 aaKnown RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 LAT2Q9GZY6 243 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 ARRDC1-AS1Q9H2J1 176 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 DPAGT1Q9H3H5 408 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 KCNK15Q9H427 330 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 ZDHHC18Q9NUE0 388 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 ARHGEF38Q9NXL2 777 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 KLHL8Q9P2G9 620 aaPredicted RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 SUCLA2Q9P2R7 463 aaPredicted RBP4.24□□□□□ -1.73
UBR1-205ENST00000564540 OSGIN1Q9UJX0 560 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 ZNF148Q9UQR1 794 aa4.24□□□□□ -1.73
UBR1-205ENST00000564540 LOC101059948A0A1B0GTJ6 334 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 A0A1W2PQ09 198 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 CTDSP2O14595 271 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 ZBED4O75132 1171 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 EFNA1P20827 205 aaPredicted RBP4.23□□□□□ -1.73
UBR1-205ENST00000564540 CX3CL1P78423 397 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 MC1RQ01726 317 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 FIGLAQ6QHK4 219 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 TMCO3Q6UWJ1 677 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 CERS3Q8IU89 383 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 MAPKAPK5-AS1Q8N8E1 139 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 OR13J1Q8NGT2 312 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 OR4C3Q8NH37 302 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 MRGPRDQ8TDS7 321 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 HPSE2Q8WWQ2 592 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 SKA1Q96BD8 255 aa4.23□□□□□ -1.73
UBR1-205ENST00000564540 ZNF689Q96CS4 500 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms