RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 LCN9Q8WX39 176 aa23.2■■□□□ 1.3
NME3-206ENST00000564252 LRFN5Q96NI6 719 aa23.2■■□□□ 1.3
NME3-206ENST00000564252 FERD3LQ96RJ6 166 aa23.2■■□□□ 1.3
NME3-206ENST00000564252 NRTNQ99748 197 aa23.2■■□□□ 1.3
NME3-206ENST00000564252 SRMSQ9H3Y6 488 aa23.2■■□□□ 1.3
NME3-206ENST00000564252 GRID2IPA4D2P6 1211 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 DDX3YO15523 660 aaKnown RBP23.19■■□□□ 1.3
NME3-206ENST00000564252 ZNF189O75820 626 aaPredicted RBP23.19■■□□□ 1.3
NME3-206ENST00000564252 SPTBP11277 2137 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 CPZQ66K79 652 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 LCN10Q6JVE6 187 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 RAD9BQ6WBX8 426 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 LRRC45Q96CN5 670 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 CHST8Q9H2A9 424 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 FANCEQ9HB96 536 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 NLE1Q9NVX2 485 aaPredicted RBP23.19■■□□□ 1.3
NME3-206ENST00000564252 ANKMY1Q9P2S6 941 aa23.19■■□□□ 1.3
NME3-206ENST00000564252 GSAPA4D1B5 854 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 BTN3A3O00478 584 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 BTN3A1O00481 513 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 IPO7O95373 1038 aaKnown RBP23.18■■□□□ 1.3
NME3-206ENST00000564252 METTL18O95568 372 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 PDHA2P29803 388 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 PRDX3P30048 256 aaKnown RBP23.18■■□□□ 1.3
NME3-206ENST00000564252 CD151P48509 253 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 CD97P48960 835 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 GSDMDP57764 484 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 PARP6Q2NL67 630 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 ZRANB3Q5FWF4 1079 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 ZNF789Q5FWF6 425 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 PLEKHS1Q5SXH7 462 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 ARHGEF18Q6ZSZ5 1173 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 DSELQ8IZU8 1212 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 ACRBPQ8NEB7 543 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 OR52E1Q8NGJ3 308 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 CPT1BQ92523 772 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 PITPNM3Q9BZ71 974 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 TFB2MQ9H5Q4 396 aaKnown RBP23.18■■□□□ 1.3
NME3-206ENST00000564252 VPS37BQ9H9H4 285 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 SYTL2Q9HCH5 934 aa23.18■■□□□ 1.3
NME3-206ENST00000564252 USP9XQ93008 2570 aaPredicted RBP23.18■■□□□ 1.3
NME3-206ENST00000564252 TNRC6AQ8NDV7 1962 aaKnown RBP23.18■■□□□ 1.3
NME3-206ENST00000564252 PIKFYVEQ9Y2I7 2098 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 MEN1O00255 615 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 IFRD1O00458 451 aaPredicted RBP23.17■■□□□ 1.3
NME3-206ENST00000564252 KLK3P07288 261 aaPredicted RBP23.17■■□□□ 1.3
NME3-206ENST00000564252 MSL3P1P0C860 447 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 ST6GAL1P15907 406 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 TPH1P17752 444 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 RORAP35398 523 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 ZNF75DP51815 510 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 MLLT10P55197 1068 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 RPA4Q13156 261 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 PIANPQ8IYJ0 282 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 CLDN19Q8N6F1 224 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 FAM71DQ8N9W8 422 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 PHC3Q8NDX5 983 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 OR1L3Q8NH93 324 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 MVB12BQ9H7P6 319 aa23.17■■□□□ 1.3
NME3-206ENST00000564252 MED13Q9UHV7 2174 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 RAB40ALP0C0E4 278 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 PREPP48147 710 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 VAV2P52735 878 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 CHAF1BQ13112 559 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 BOP1Q14137 746 aaKnown RBP23.16■■□□□ 1.3
NME3-206ENST00000564252 TAS2R42Q7RTR8 314 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 ENDOVQ8N8Q3 282 aaKnown RBP23.16■■□□□ 1.3
NME3-206ENST00000564252 ADAMTS17Q8TE56 1095 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 CDKN2AIPNLQ96HQ2 116 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 MRFAP1L1Q96HT8 127 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 LRRC40Q9H9A6 602 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 PCMTD2Q9NV79 361 aa23.16■■□□□ 1.3
NME3-206ENST00000564252 PCDHGA9Q9Y5G4 932 aaKnown RBP23.16■■□□□ 1.3
NME3-206ENST00000564252 USP9YO00507 2555 aaPredicted RBP23.15■■□□□ 1.3
NME3-206ENST00000564252 ARGFXA6NJG6 315 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 TMEM150CB9EJG8 249 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 CAPN1P07384 714 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 LMAN1P49257 510 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 GDF10P55107 478 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 CACNG1Q06432 222 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 KLF1Q13351 362 aaPredicted RBP23.15■■□□□ 1.3
NME3-206ENST00000564252 POU6F1Q14863 301 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 DBN1Q16643 649 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 AMIGO1Q86WK6 493 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 ADGRF3Q8IZF5 1079 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 TTC13Q8NBP0 860 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 STYXQ8WUJ0 223 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 TFGQ92734 400 aaPredicted RBP23.15■■□□□ 1.3
NME3-206ENST00000564252 CLIP3Q96DZ5 547 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 TRAPPC9Q96Q05 1148 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 HGH1Q9BTY7 390 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 ING2Q9H160 280 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 XKR8Q9H6D3 395 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 MLXIPLQ9NP71 852 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 AMFRQ9UKV5 643 aa23.15■■□□□ 1.3
NME3-206ENST00000564252 GOLGA6L9A6NEM1 432 aa23.14■■□□□ 1.29
NME3-206ENST00000564252 GSTM1P09488 218 aa23.14■■□□□ 1.29
NME3-206ENST00000564252 PVRP15151 417 aa23.14■■□□□ 1.29
NME3-206ENST00000564252 PSMA3P25788 255 aa23.14■■□□□ 1.29
NME3-206ENST00000564252 PTGIRP43119 386 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms