RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 TMED2Q15363 201 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 ANKRD22Q5VYY1 191 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 PTRHD1Q6GMV3 140 aaKnown RBP19.33■□□□□ 0.68
CMTM3-207ENST00000564060 PCGF5Q86SE9 256 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 CAND1Q86VP6 1230 aaKnown RBP19.33■□□□□ 0.68
CMTM3-207ENST00000564060 PMEPA1Q969W9 287 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 SERPINB12Q96P63 405 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 UBL7Q96S82 380 aaPredicted RBP19.33■□□□□ 0.68
CMTM3-207ENST00000564060 TCF12Q99081 682 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 TRIT1Q9H3H1 467 aaKnown RBP19.33■□□□□ 0.68
CMTM3-207ENST00000564060 TFB2MQ9H5Q4 396 aaKnown RBP19.33■□□□□ 0.68
CMTM3-207ENST00000564060 CPNE5Q9HCH3 593 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 ASIC3Q9UHC3 531 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 PCYOX1Q9UHG3 505 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 POLG2Q9UHN1 485 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 ASF1AQ9Y294 204 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 VPS9D1Q9Y2B5 631 aa19.33■□□□□ 0.68
CMTM3-207ENST00000564060 FAM237BA0A1B0GVD1 139 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 OR6C74A6NCV1 312 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 K7ENP7 123 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 NELFEP18615 380 aaKnown RBP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 OGNP20774 298 aaKnown RBP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 RPS3P23396 243 aaKnown RBP eCLIP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 PAFAH1B1P43034 410 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 BRD3Q15059 726 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 TGIF1Q15583 401 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 ARHGAP40Q5TG30 622 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 INO80CQ6PI98 192 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 SYDE1Q6ZW31 735 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 TBC1D21Q8IYX1 336 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 IL22RA1Q8N6P7 574 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 NAT8LQ8N9F0 302 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 ZSCAN1Q8NBB4 408 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 SIDT2Q8NBJ9 832 aaKnown RBP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 OR4E2Q8NGC2 313 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 OR52E1Q8NGJ3 308 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 CAPZA3Q96KX2 299 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 OR6C1Q96RD1 312 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 CTRCQ99895 268 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 DDX47Q9H0S4 455 aaKnown RBP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 MARCH4Q9P2E8 410 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-207ENST00000564060 RNF14Q9UBS8 474 aa19.32■□□□□ 0.68
CMTM3-207ENST00000564060 ITPR1Q14643 2758 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 H3BMM5 538 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 GOLGA8MH3BSY2 632 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 CCDC188H7C350 402 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 KIF1CO43896 1103 aaKnown RBP19.31■□□□□ 0.68
CMTM3-207ENST00000564060 AVILO75366 819 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 RPN2P04844 631 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 RHDQ02161 417 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 ACY1Q03154 408 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 PTK6Q13882 451 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 DHX34Q14147 1143 aaKnown RBP19.31■□□□□ 0.68
CMTM3-207ENST00000564060 DNAJC21Q5F1R6 531 aaKnown RBP19.31■□□□□ 0.68
CMTM3-207ENST00000564060 CES3Q6UWW8 571 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 LDB1Q86U70 411 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-207ENST00000564060 BPHLQ86WA6 291 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-207ENST00000564060 SLC22A15Q8IZD6 547 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 GSDMBQ8TAX9 411 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 SLC41A2Q96JW4 573 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 MAP3K3Q99759 626 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 HGH1Q9BTY7 390 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 APMAPQ9HDC9 416 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 PDE7BQ9NP56 450 aa19.31■□□□□ 0.68
CMTM3-207ENST00000564060 TMEM184BQ9Y519 407 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-207ENST00000564060 IGHV5-51A0A0C4DH38 117 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 MAP3K7O43318 606 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 RAD1O60671 282 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 ZBTB11O95625 1053 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-207ENST00000564060 ITGB6P18564 788 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 POLR2CP19387 275 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-207ENST00000564060 ARNTP27540 789 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 MAP4P27816 1152 aaKnown RBP19.3■□□□□ 0.68
CMTM3-207ENST00000564060 ACADLP28330 430 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 SHMT2P34897 504 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 MAGEA3P43357 314 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 PPP1CAP62136 330 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 HSD11B2P80365 405 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 HSPA14Q0VDF9 509 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 MAP7Q14244 749 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 KCTD19Q17RG1 926 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-207ENST00000564060 TYSND1Q2T9J0 566 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 TMTC4Q5T4D3 741 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 HOOK3Q86VS8 718 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 AMIGO1Q86WK6 493 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 CREG2Q8IUH2 290 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 CACNA2D3Q8IZS8 1091 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 NLGN4XQ8N0W4 816 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 PHC3Q8NDX5 983 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 NLGN4YQ8NFZ3 816 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-207ENST00000564060 OR5K2Q8NHB8 316 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 NKD1Q969G9 470 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 ZNF669Q96BR6 464 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-207ENST00000564060 P2RY12Q9H244 342 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 PILRAQ9UKJ1 303 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 POMT2Q9UKY4 750 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 MRFAP1Q9Y605 127 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 RPS6KL1Q9Y6S9 549 aa19.3■□□□□ 0.68
CMTM3-207ENST00000564060 GSAPA4D1B5 854 aa19.29■□□□□ 0.68
CMTM3-207ENST00000564060 C2orf74A8MZ97 194 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms