RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 APOBEC4Q8WW27 367 aaKnown RBP17.19■□□□□ 0.34
NME3-205ENST00000563854 ELMO1Q92556 727 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 FRMD8P1Q9BZ68 369 aaPredicted RBP17.19■□□□□ 0.34
NME3-205ENST00000563854 KLHL25Q9H0H3 589 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 XKR8Q9H6D3 395 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 LZTFL1Q9NQ48 299 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 LHX9Q9NQ69 397 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 ZNF71Q9NQZ8 489 aaPredicted RBP17.19■□□□□ 0.34
NME3-205ENST00000563854 SLC2A6Q9UGQ3 507 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 KCND3Q9UK17 655 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 POMT2Q9UKY4 750 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 HEATR9A2RTY3 570 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 MROH6A6NGR9 719 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 SLC9B1P1A6NJY1 282 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 ERI2A8K979 691 aaKnown RBP17.18■□□□□ 0.34
NME3-205ENST00000563854 BTN3A1O00481 513 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 SCRG1O75711 98 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 FOXN2P32314 431 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 NSG1P42857 185 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 TUBB4BP68371 445 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 TUBB2AQ13885 445 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 FAM199XQ6PEV8 388 aaPredicted RBP17.18■□□□□ 0.34
NME3-205ENST00000563854 ATG14Q6ZNE5 492 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 TFGQ92734 400 aaPredicted RBP17.18■□□□□ 0.34
NME3-205ENST00000563854 HDAC10Q969S8 669 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 RUFY1Q96T51 708 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 TUBB2BQ9BVA1 445 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 TWSG1Q9GZX9 223 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 FANCEQ9HB96 536 aa17.18■□□□□ 0.34
NME3-205ENST00000563854 FLNBO75369 2602 aaKnown RBP17.18■□□□□ 0.34
NME3-205ENST00000563854 SETXQ7Z333 2677 aaKnown RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 PIPSLA2A3N6 862 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 MATN2O00339 956 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 BTN3A3O00478 584 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 ARHGAP6O43182 974 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 CPNE3O75131 537 aaKnown RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 AP2A2O94973 939 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 GOT2P00505 430 aaKnown RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 FTH1P02794 183 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 APRTP07741 180 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 FURINP09958 794 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 ZSCAN5DPP0CG00 497 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 CSE1LP55060 971 aaKnown RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 RPS18P62269 152 aaKnown RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 RPA4Q13156 261 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 ITIH4Q14624 930 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 ZNF658BQ4V348 819 aaPredicted RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 TSTD2Q5T7W7 516 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 MEI1Q5TIA1 1274 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 AFTPHQ6ULP2 937 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 TMEM135Q86UB9 458 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 BPHLQ86WA6 291 aaPredicted RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 AMIGO1Q86WK6 493 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 GLIS1Q8NBF1 620 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 OR5AR1Q8NGP9 310 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 OR13J1Q8NGT2 312 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 OR6P1Q8NGX9 317 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 MR1Q95460 341 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 ACTL8Q9H568 366 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 MVB12BQ9H7P6 319 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 AKIRIN1Q9H9L7 192 aaPredicted RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 KCND1Q9NSA2 647 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 ASF1AQ9Y294 204 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 TDRKHQ9Y2W6 561 aaKnown RBP17.17■□□□□ 0.34
NME3-205ENST00000563854 TENM4Q6N022 2769 aa17.17■□□□□ 0.34
NME3-205ENST00000563854 QSOX1O00391 747 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 TERTO14746 1132 aaKnown RBP17.16■□□□□ 0.34
NME3-205ENST00000563854 LIN7AO14910 233 aaPredicted RBP17.16■□□□□ 0.34
NME3-205ENST00000563854 OR1I1O60431 355 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 CREG1O75629 220 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 SUN1O94901 812 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 GSTM1P09488 218 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 OR56A5P0C7T3 313 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 PVRP15151 417 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 ST6GAL1P15907 406 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 CD151P48509 253 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 PRAMEP78395 509 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 GSTM4Q03013 218 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 SEMA5AQ13591 1074 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 LAMB3Q13751 1172 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 PRAMEF17Q5VTA0 474 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 PACS1Q6VY07 963 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 HOOK3Q86VS8 718 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 CARFQ8N187 725 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 PPHLN1Q8NEY8 458 aaKnown RBP17.16■□□□□ 0.34
NME3-205ENST00000563854 ZNF501Q96CX3 271 aaPredicted RBP17.16■□□□□ 0.34
NME3-205ENST00000563854 ZNF778Q96MU6 729 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 FCRL4Q96PJ5 515 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 TTC1Q99614 292 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 C1GALT1Q9NS00 363 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 PAK5Q9P286 719 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 TUBD1Q9UJT1 453 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 POLHQ9Y253 713 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 BTRCQ9Y297 605 aa17.16■□□□□ 0.34
NME3-205ENST00000563854 C2orf74A8MZ97 194 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 C21orf140B9A014 251 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 TMEM150CB9EJG8 249 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 MAP3K7O43318 606 aa17.15■□□□□ 0.34
NME3-205ENST00000563854 SUV39H1O43463 412 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms